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Series GSE225950 Query DataSets for GSE225950
Status Public on May 03, 2023
Title Transcriptomics reveals molecular differences in equine oocytes vitrified before and after in vitro maturation
Organism Equus caballus
Experiment type Expression profiling by high throughput sequencing
Summary The aim of this study was to analyze transcriptome profiles with RNA sequencing (RNA-seq) in metaphase II horse oocytes after vitrification before and after in vitro maturation (IVM). To do so, transcriptome profile of three groups were compared: (1) oocytes vitrified immature, warmed, and in vitro matured (VGV), (2) in vitro matured and vitrified (VMAT), and (3) fresh oocytes (CONTROL).
 
Overall design Examining the effects vitrification before and after in vitro maturation on the transcriptomic level of the mature oocyte.
 
Contributor(s) Velez DA, Pavani KC, Meese T, Smits K, Van Nieuwerburgh F, Van Soom A
Citation(s) 37108081
Submission date Feb 23, 2023
Last update date May 05, 2023
Contact name Katrien Smits
E-mail(s) katrien.smits@ugent.be
Organization name Ghent University
Department Internal Medicine, Reproduction and Population Medicine
Street address Salisburylaan 133
City Merelbeke
ZIP/Postal code 9820
Country Belgium
 
Platforms (1)
GPL21401 Illumina NextSeq 500 (Equus caballus)
Samples (12)
GSM7060863 Vitrified in germinal vesicle-VGV-1
GSM7060864 Vitrified in germinal vesicle-VGV-2
GSM7060865 Vitrified in germinal vesicle-VGV-3
Relations
BioProject PRJNA938101

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE225950_normalized_counts_deseq2.csv.gz 503.2 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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