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| Status |
Public on Jun 16, 2013 |
| Title |
ChIP-chip from HEK293 cells with YY2-antibody |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
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| Summary |
The Yin Yang 2 (YY2) gene encodes a zinc finger transcription factor that is not well characterized, yet. By using chromatin immunoprecipitations combined with whole-genome human promoter microarray (ChIP-chip) in HEK293 cells, we identified a multiplicity of YY2-bound annotated promoters as well as additional chromosomal regions. Interestingly, gene ontology analyses linked YY2 to fundamental biological pathways associated to cancer and developmental processes.
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| Overall design |
Identification of YY2 target genes in HEK293 cells in vivo
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| Contributor(s) |
Drews D, Klar M, von Salisch S, Dame C |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Jun 28, 2010 |
| Last update date |
Jun 16, 2013 |
| Contact name |
David Drews |
| Organization name |
Charite
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| Street address |
Augustenburger Platz 1
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| City |
Berlin |
| ZIP/Postal code |
13353 |
| Country |
Germany |
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| Platforms (1) |
| GPL10616 |
NimbleGen Homo sapiens 2.1 M promoter |
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| Samples (1) |
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| Relations |
| BioProject |
PRJNA128379 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE22599_RAW.tar |
270.2 Mb |
(http)(custom) |
TAR (of PAIR, TXT) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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