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| Status |
Public on Aug 08, 2023 |
| Title |
Transcriptome in Rat liver, 3 months after 7 weeks of control diet, high fat diet or heat-mositure-treated high fat diet |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
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| Summary |
In the present study, we designed a 7-week rat model, consuming high-fat diet or heat-misture-treated high fat diet. The liver was used for microarray analyses.
Transcriptome profiling reveal that high-fat diet with or with out heat-moisture treatment induced different transcriptome changes, mainly on lipid metabolism and inflammation.
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| Overall design |
High-fat diet, or heat-moisture-treated high-fat diet were administrated to rats, the livers were used for RNA extraction and hybridization on Affymetrix microarrays.
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| Contributor(s) |
Ma S, Jia H, Kato H |
| Citation(s) |
37512566 |
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| Submission date |
Feb 28, 2023 |
| Last update date |
Aug 09, 2023 |
| Contact name |
Sihui Ma |
| E-mail(s) |
masihui@toki.waseda.jp
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| Organization name |
The university of Tokyo
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| Street address |
Yayoi 1-1-1
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| City |
Tokyo |
| ZIP/Postal code |
1130032 |
| Country |
Japan |
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| Platforms (1) |
| GPL1355 |
[Rat230_2] Affymetrix Rat Genome 230 2.0 Array |
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| Samples (12)
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| GSM7071054 |
Liver, control sample,bio rep4 |
| GSM7071055 |
Liver, high-fat-diet sample,bio rep1 |
| GSM7071056 |
Liver, high-fat-diet sample,bio rep2 |
| GSM7071057 |
Liver, high-fat-diet sample,bio rep3 |
| GSM7071058 |
Liver, high-fat-diet sample,bio rep4 |
| GSM7071059 |
Liver, high-fat-diet with heat-moisture treatment sample,bio rep1 |
| GSM7071060 |
Liver, high-fat-diet with heat-moisture treatment sample,bio rep2 |
| GSM7071061 |
Liver, high-fat-diet with heat-moisture treatment sample,bio rep3 |
| GSM7071062 |
Liver, high-fat-diet with heat-moisture treatment sample,bio rep4 |
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| Relations |
| BioProject |
PRJNA939625 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE226305_Background.docx.gz |
30.3 Kb |
(ftp)(http) |
DOCX |
| GSE226305_Processed_Data.xlsx |
57.2 Mb |
(ftp)(http) |
XLSX |
| GSE226305_RAW.tar |
26.2 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data are available on Series record |
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