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Series GSE226312 Query DataSets for GSE226312
Status Public on May 03, 2023
Title Assessing kidney injury induced by mercuric chloride in guinea pigs with in vivo and in vitro experiments [in vivo]
Organism Cavia porcellus
Experiment type Expression profiling by high throughput sequencing
Summary In this study we tested the ability to predict organ injury from in vivo transcriptomics data in male Hartley guinea pigs at early time points after exposure to mercury chloride (9 and 33 hours). We selected mercury chloride, a compound extensively used in animal studies for its ability to cause acute kidney damage.
 
Overall design We treated male Hartley guinea pigs with saline solution (control), 1.00 mg/kg (low dose), and 1.50 mg/kg (high dose) to produce different degrees of injury. RNA samples for gene expression analysis were collected from the kidney at 9 and 33 hours. Number of repicates were five.
 
Contributor(s) Goel H, Pannala V, AbdulHameed MD, Printz RL, Shiota C, Estes SK, Shiota M, Wallqvist A
Citation(s) 37108594
Submission date Feb 28, 2023
Last update date May 04, 2023
Contact name Himanshu Goel
E-mail(s) hgoel@bhsai.org
Organization name Biotechnology HPC Software Applications Institute (BHSAI)
Street address 2405 Whittier Drive, Suite 200
City Frederick
State/province MD
ZIP/Postal code 21702
Country USA
 
Platforms (1)
GPL28437 Illumina NovaSeq 6000 (Cavia porcellus)
Samples (30)
GSM7072830 2517-RP-31
GSM7072831 2517-RP-32
GSM7072832 2517-RP-33
This SubSeries is part of SuperSeries:
GSE226313 Assessing kidney injury induced by mercuric chloride in guinea pigs with in vivo and in vitro experiments
Relations
BioProject PRJNA939686

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE226312_RAW.tar 11.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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