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Series GSE226643 Query DataSets for GSE226643
Status Public on Aug 07, 2023
Title Time-course gene expression profiles to understand compositional changes of the E. coli K-12 MG1655 transcriptiome during the transition from the exponential growth to the stationary phase
Organism Escherichia coli K-12
Experiment type Expression profiling by high throughput sequencing
Summary Time-course gene expression profiles to understand compositional changes of the E. coli K-12 MG1655 transcriptiome during the transition from the exponential growth to the stationary phase
 
Overall design Ribosomal RNA removed RNA prepared from cell cultures of E. coli K-12 MG1655
 
Contributor(s) Lim H, Palsson BO
Citation(s) 37090546
Submission date Mar 04, 2023
Last update date Aug 07, 2023
Contact name Bernhard O. Palsson
Organization name University of California, San Diego
Department Bioengineering
Lab Systems Biology Research Group
Street address 9500 Gilman Dr
City San Diego
State/province California
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL26856 Illumina NovaSeq 6000 (Escherichia coli K-12)
Samples (36)
GSM7080891 E. coli K-12 MG1655 grown in a minimal medium at 3 h, replicate 1
GSM7080892 E. coli K-12 MG1655 grown in a minimal medium at 3 h, replicate 2
GSM7080893 E. coli K-12 MG1655 grown in a minimal medium at 4 h, replicate 1
Relations
BioProject PRJNA940980

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE226643_X.csv.gz 846.2 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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