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Series GSE227058 Query DataSets for GSE227058
Status Public on Mar 12, 2023
Title The role of miR-99a-5p in the immune regulation of host macrophages infected by Mycobacterium tuberculosis
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary This study aims to identify the specific miRNA of mycobacterium tuberculosis (M.tb) infected THP-1 by next-generation sequencing, and further to explore the role of miRNA in innate immunity against M.tb infection.Comprehensive analysis of the next-generation sequencing results showed that the expression of miR-99a-5p was significantly lower in the MTB infected THP-1 cells.
 
Overall design The miRNA expression profile in THP-1 cells with or without M.tb (H37Rv) infection was detected using Illumina HiSeq2500 next-generation sequencing platform.
 
Contributor(s) Shi Y, Pan L
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 09, 2023
Last update date Mar 14, 2023
Contact name Yuting Shi
E-mail(s) shiyuting626@126.com
Phone 15765304374
Organization name Beijing Chest Hospital, Capital Medical University
Street address No. 97 Ma Chang, Tongzhou District,Beijing of China
City Bei Jing
ZIP/Postal code 101149
Country China
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM7090799 cell, uninfection, rep1
GSM7090800 cell, uninfection, rep2
GSM7090801 cell, uninfection, rep3
Relations
BioProject PRJNA942973

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227058_RAW.tar 50.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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