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Series GSE228170 Query DataSets for GSE228170
Status Public on Jul 16, 2024
Title 4C-Seq Drosophila Imaginal Disc HP6/Umbrea
Organism Drosophila melanogaster
Experiment type Other
Summary Chromosomal conformation capture in Drosophila melanogaster with a viewpoint of the HP6/Umbrea locus
 
Overall design imaginal disc tissue is dissected in 1x PBS in 10m intervals, flash frozen. Single nucleus suspension, then double digestion using DpnII and XbaI.
 
Contributor(s) Lee U
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 24, 2023
Last update date Jul 16, 2024
Contact name UnJin Lee
E-mail(s) ulee@rockefeller.edu
Phone 5619260489
Organization name The Rockefeller University
Street address 1230 York Ave
City NEW YORK
State/province NY
ZIP/Postal code 10065-7912
Country USA
 
Platforms (1)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (1)
GSM7115965 4C-Seq melanogaster imaginal disc HP6/Umbrea
Relations
BioProject PRJNA948431

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228170_RAW.tar 2.2 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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