|
| Status |
Public on Nov 06, 2023 |
| Title |
Transcriptional and splicing response of two Arabidopsis thaliana natural accessions to ABA-mediated stress. |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq experiment to study the transcriptional and splicing changes of two Arabidopsis thaliana natural accessions, Col-0 and Kn-0, grown for 4 days under normal conditions and transferred to control medium or 5 µM ABA for 3 hours.
|
| |
|
| Overall design |
Four day-old seedlings from Col-0 and Kn-0 Arabidopsis thaliana natural accessions exposed to either control conditions or 5 µM ABA for 3 hours. Three biological replicates were used per accession per treatment.
|
| |
|
| Contributor(s) |
Díez AR, Duque P |
| Citation(s) |
38659400 |
| |
| Submission date |
Mar 27, 2023 |
| Last update date |
Apr 25, 2024 |
| Contact name |
Alba Rodríguez Díez |
| Organization name |
Instituto Gulbenkian de Ciência
|
| Lab |
Plant Molecular Biology
|
| Street address |
Rua da Quinta Grande, 6
|
| City |
Oeiras |
| State/province |
Lisboa |
| ZIP/Postal code |
2780-156 |
| Country |
Portugal |
| |
|
| Platforms (1) |
| GPL17639 |
Illumina HiSeq 2500 (Arabidopsis thaliana) |
|
| Samples (12)
|
| GSM7118519 |
4 day-old Col-0 seedlings 3-h mock treatment rep1 |
| GSM7118520 |
4 day-old Col-0 seedlings 3-h mock treatment rep2 |
| GSM7118521 |
4 day-old Col-0 seedlings 3-h mock treatment rep3 |
| GSM7118522 |
4 day-old Col-0 seedlings 3-h ABA treatment rep1 |
| GSM7118523 |
4 day-old Col-0 seedlings 3-h ABA treatment rep2 |
| GSM7118524 |
4 day-old Col-0 seedlings 3-h ABA treatment rep3 |
| GSM7118525 |
4 day-old Kn-0 seedlings 3-h mock treatment rep1 |
| GSM7118526 |
4 day-old Kn-0 seedlings 3-h mock treatment rep2 |
| GSM7118527 |
4 day-old Kn-0 seedlings 3-h mock treatment rep3 |
| GSM7118528 |
4 day-old Kn-0 seedlings 3-h ABA treatment rep1 |
| GSM7118529 |
4 day-old Kn-0 seedlings 3-h ABA treatment rep2 |
| GSM7118530 |
4 day-old Kn-0 seedlings 3-h ABA treatment rep3 |
|
| Relations |
| BioProject |
PRJNA949227 |
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