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GEO accession:
Series GSE229029
Query DataSets for GSE229029
Status
Public on May 21, 2024
Title
Deciphering lineage specification during early embryogenesis in mouse gastruloids using integrative multi-layered proteomics
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
38754429
Submission date
Apr 05, 2023
Last update date
May 22, 2024
Contact name
Suzan Stelloo
E-mail(s)
Stelloo@science.ru.nl
Organization name
Radboud University
Department
Molecular Biology
Street address
Geert Grooteplein Zuid 28
City
Nijmegen
ZIP/Postal code
6525 GA
Country
Netherlands
Platforms (3)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL30172
NextSeq 2000 (Mus musculus)
GPL30173
NextSeq 2000 (Homo sapiens)
Samples (44)
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GSM7147964
ChIP_p300_mESCs_1
GSM7147965
ChIP_p300_mESCs_2
GSM7147966
input_mESCs
GSM7147967
ChIP_p300_gastruloids_1
GSM7147968
ChIP_p300_gastruloids_2
GSM7147969
input_gastruloids
GSM7147970
ChIP_Rxrα_mESCs_1
GSM7147971
ChIP_Rxrα_mESCs_2
GSM7147972
ChIP_Rxrα_gastruloids_1
GSM7147973
ChIP_Rxrα_gastruloids_2
GSM7147974
ChIP_Sp5_gastruloids_1
GSM7147975
ChIP_Sp5_gastruloids_2
GSM7147976
ChIP_Zeb2_gastruloids_1
GSM7147977
ChIP_Zeb2_gastruloids_2
GSM7147978
RNAseq_somitic_gastruloids_untreated_1
GSM7147979
RNAseq_somitic_gastruloids_dTAG13_1
GSM7147980
RNAseq_somitic_gastruloids_untreated_2
GSM7147981
RNAseq_somitic_gastruloids_dTAG13_2
GSM7147997
scRNA_somitic_gastruloids_Zeb2_untreated
GSM7147998
scRNA_somitic_gastruloids_Zeb2_dTAG13
GSM8002044
RNAseq_mouse_gastruloids_0h_1
GSM8002045
RNAseq_mouse_gastruloids_0h_2
GSM8002046
RNAseq_mouse_gastruloids_0h_3
GSM8002047
RNAseq_mouse_gastruloids_48h_1
GSM8002048
RNAseq_mouse_gastruloids_48h_2
GSM8002049
RNAseq_mouse_gastruloids_48h_3
GSM8002050
RNAseq_mouse_gastruloids_72h_1
GSM8002051
RNAseq_mouse_gastruloids_72h_2
GSM8002052
RNAseq_mouse_gastruloids_72h_3
GSM8002053
RNAseq_mouse_gastruloids_96h_1
GSM8002054
RNAseq_mouse_gastruloids_96h_2
GSM8002055
RNAseq_mouse_gastruloids_96h_3
GSM8002056
RNAseq_mouse_gastruloids_120h_1
GSM8002057
RNAseq_mouse_gastruloids_120h_2
GSM8002058
RNAseq_mouse_gastruloids_120h_3
GSM8002059
RNAseq_human_somitoids_WT_1
GSM8002060
RNAseq_human_somitoids_WT_2
GSM8002061
RNAseq_human_somitoids_WT_3
GSM8002062
RNAseq_human_somitoids_ZEB2_HetKO_1
GSM8002063
RNAseq_human_somitoids_ZEB2_HetKO_2
GSM8002064
RNAseq_human_somitoids_ZEB2_HetKO_3
GSM8002065
RNAseq_human_somitoids_ZEB2_HomKO_1
GSM8002066
RNAseq_human_somitoids_ZEB2_HomKO_2
GSM8002067
RNAseq_human_somitoids_ZEB2_HomKO_3
This SuperSeries is composed of the following SubSeries:
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GSE229024
Deciphering lineage specification during early embryogenesis in mouse gastruloids using integrative multi-layered proteomics [ChIP-seq]
GSE229025
Deciphering lineage specification during early embryogenesis in mouse gastruloids using integrative multi-layered proteomics [RNA]
GSE229028
Deciphering lineage specification during early embryogenesis in mouse gastruloids using integrative multi-layered proteomics [scRNA-seq]
GSE252488
Deciphering lineage specification during early embryogenesis using integrative multi-layered proteomics [RNA-Seq]
Relations
BioProject
PRJNA952600
Download family
Format
SOFT formatted family file(s)
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TXT
Supplementary file
Size
Download
File type/resource
GSE229029_RAW.tar
253.8 Mb
(http)
(custom)
TAR (of MTX, NARROWPEAK, TSV)
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