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Status |
Public on May 24, 2023 |
Title |
Single-Cell Transcriptomics of Epstein-Barr Virus and Human Herpesvirus 6 Coinfection |
Organisms |
Homo sapiens; human gammaherpesvirus 4; Human betaherpesvirus 6A; Human betaherpesvirus 6B |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
Epstein-Barr virus (EBV) and human herpesvirus 6 (HHV-6) infection is widespread among people. Here I describe single-cell RNA sequencing of two lymphoblastoid cell lines harboring both episomal EBV and inherited chromosomally integrated HHV-6. Rare instances of HHV-6 expression appear enriched with EBV reactivation.
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Overall design |
Single-cell RNA-seq transcriptomes of lymphoblastoid cell lines coinfected with Epstein-Barr virus and human herpesvirus 6
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Contributor(s) |
Miranda JL |
Citation(s) |
37338391 |
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Submission date |
Apr 21, 2023 |
Last update date |
Aug 23, 2023 |
Contact name |
JJ Miranda |
E-mail(s) |
jmiranda@barnard.edu
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Organization name |
Barnard College, Columbia University
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Street address |
3009 Broadway
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City |
New York |
ZIP/Postal code |
10027 |
Country |
USA |
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Platforms (2) |
GPL33355 |
Illumina NovaSeq 6000 (Homo sapiens; Human betaherpesvirus 6B; Human gammaherpesvirus 4) |
GPL33373 |
Illumina NovaSeq 6000 (Homo sapiens; Human betaherpesvirus 6A; Human gammaherpesvirus 4) |
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Samples (2) |
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Relations |
BioProject |
PRJNA958108 |