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| Status |
Public on May 24, 2023 |
| Title |
Single-Cell Transcriptomics of Epstein-Barr Virus and Human Herpesvirus 6 Coinfection |
| Organisms |
Homo sapiens; human gammaherpesvirus 4; Human betaherpesvirus 6A; Human betaherpesvirus 6B |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Epstein-Barr virus (EBV) and human herpesvirus 6 (HHV-6) infection is widespread among people. Here I describe single-cell RNA sequencing of two lymphoblastoid cell lines harboring both episomal EBV and inherited chromosomally integrated HHV-6. Rare instances of HHV-6 expression appear enriched with EBV reactivation.
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| |
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| Overall design |
Single-cell RNA-seq transcriptomes of lymphoblastoid cell lines coinfected with Epstein-Barr virus and human herpesvirus 6
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| Contributor(s) |
Miranda JL |
| Citation(s) |
37338391 |
| |
| Submission date |
Apr 21, 2023 |
| Last update date |
Aug 23, 2023 |
| Contact name |
JJ Miranda |
| E-mail(s) |
jmiranda@barnard.edu
|
| Organization name |
Barnard College, Columbia University
|
| Street address |
3009 Broadway
|
| City |
New York |
| ZIP/Postal code |
10027 |
| Country |
USA |
| |
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| Platforms (2) |
| GPL33355 |
Illumina NovaSeq 6000 (Homo sapiens; Human betaherpesvirus 6B; Human gammaherpesvirus 4) |
| GPL33373 |
Illumina NovaSeq 6000 (Homo sapiens; Human betaherpesvirus 6A; Human gammaherpesvirus 4) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA958108 |
