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Series GSE230455 Query DataSets for GSE230455
Status Public on Dec 31, 2023
Title Investigating the role of telomere length in 3D spatiotemporal gene regulation in cardiomyocytes [CUT&Tag]
Organism Homo sapiens
Experiment type Genome variation profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Telomeres, TTAGGGn DNA repeat sequences located at the ends of eukaryotic chromosomes, play a pivotal role in ageing and are targets of DNA damage and DNA damage response. Although short telomeres have been implicated in heart failure, little is known about the role of telomeres in cardiomyocytes.To fill this gap in knowledge, we studied myocardial ageing in the form of telomere lengths under isogenic background.
 
Overall design CUT&Tag for FOXC1 in CONTROL and FOXC1 OE hiPSCs-derived cardiomyocytes.
 
Contributor(s) Chang AC, Bian Q, Li B, zuo W
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 24, 2023
Last update date Jan 01, 2024
Contact name Bin Li
E-mail(s) leo1989jt@gmail.com
Organization name Shanghai jiaotong University
Street address Jinzun Road
City Shanghai
ZIP/Postal code 200120
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (10)
GSM7224069 Control
GSM7224070 FOXC1 OE
GSM7925349 WT_H3K27ME3_Rep1
This SubSeries is part of SuperSeries:
GSE217703 Investigating the role of telomere length in 3D spatiotemporal gene regulation in cardiomyocytes
Relations
BioProject PRJNA961155

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230455_RAW.tar 1.1 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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