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GEO accession:
Series GSE231486
Query DataSets for GSE231486
Status
Public on Aug 21, 2023
Title
Genome-wide Transcription Factor binding maps reveal cell-specific changes in the regulatory architecture of human HSPC
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
37595278
Submission date
May 02, 2023
Last update date
Aug 22, 2023
Contact name
Julie Thoms
E-mail(s)
j.thoms@unsw.edu.au
Organization name
UNSW Sydney
Department
Adult Cancer Program
Street address
Level 2, C25 Lowy Cancer Research Centre, UNSW Sydney, High St
City
Randwick
State/province
NSW
ZIP/Postal code
2052
Country
Australia
Platforms (1)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (156)
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More...
GSM7277346
ChIPmentation_CMP_ERG_rep1
GSM7277347
ChIPmentation_CMP_ERG_rep2
GSM7277348
ChIPmentation_CMP_ERG_rep3
GSM7277349
ChIPmentation_CMP_FLI1_rep1
GSM7277350
ChIPmentation_CMP_FLI1_rep2
GSM7277351
ChIPmentation_CMP_FLI1_rep3
GSM7277352
ChIPmentation_CMP_GATA2_rep1
GSM7277353
ChIPmentation_CMP_GATA2_rep2
GSM7277354
ChIPmentation_CMP_GATA2_rep3
GSM7277355
ChIPmentation_CMP_IgG
GSM7277356
ChIPmentation_CMP_LMO2_rep1
GSM7277357
ChIPmentation_CMP_LMO2_rep2
GSM7277358
ChIPmentation_CMP_LMO2_rep3
GSM7277359
ChIPmentation_CMP_LYL1_rep1
GSM7277360
ChIPmentation_CMP_LYL1_rep2
GSM7277362
ChIPmentation_CMP_LYL1_rep3
GSM7277365
ChIPmentation_CMP_RUNX1_rep1
GSM7277367
ChIPmentation_CMP_RUNX1_rep2
GSM7277369
ChIPmentation_CMP_RUNX1_rep3
GSM7277370
ChIPmentation_CMP_TAL1_rep1
GSM7277372
ChIPmentation_CMP_TAL1_rep2
GSM7277374
ChIPmentation_CMP_TAL1_rep3
GSM7277375
ChIPmentation_HSC_ERG_rep1
GSM7277377
ChIPmentation_HSC_ERG_rep2
GSM7277379
ChIPmentation_HSC_ERG_rep3
GSM7277380
ChIPmentation_HSC_FLI1_rep1
GSM7277382
ChIPmentation_HSC_FLI1_rep2
GSM7277384
ChIPmentation_HSC_FLI1_rep3
GSM7277386
ChIPmentation_HSC_GATA2_rep1
GSM7277388
ChIPmentation_HSC_GATA2_rep2
GSM7277390
ChIPmentation_HSC_GATA2_rep3
GSM7277391
ChIPmentation_HSC_IgG
GSM7277393
ChIPmentation_HSC_LMO2_rep1
GSM7277395
ChIPmentation_HSC_LMO2_rep2
GSM7277396
ChIPmentation_HSC_LMO2_rep3
GSM7277397
ChIPmentation_HSC_LYL1_rep1
GSM7277398
ChIPmentation_HSC_LYL1_rep2
GSM7277399
ChIPmentation_HSC_LYL1_rep3
GSM7277400
ChIPmentation_HSC_RUNX1_rep1
GSM7277401
ChIPmentation_HSC_RUNX1_rep2
GSM7277402
ChIPmentation_HSC_RUNX1_rep3
GSM7277403
ChIPmentation_HSC_TAL1_rep1
GSM7277404
ChIPmentation_HSC_TAL1_rep2
GSM7277405
ChIPmentation_HSC_TAL1_rep3
GSM7277406
ChIPmentation_GMP_ERG_rep1
GSM7277407
ChIPmentation_GMP_ERG_rep2
GSM7277408
ChIPmentation_GMP_ERG_rep3
GSM7277409
ChIPmentation_GMP_FLI1_rep1
GSM7277410
ChIPmentation_GMP_FLI1_rep2
GSM7277411
ChIPmentation_GMP_FLI1_rep3
GSM7277412
ChIPmentation_GMP_GATA2_rep1
GSM7277413
ChIPmentation_GMP_GATA2_rep2
GSM7277414
ChIPmentation_GMP_GATA2_rep3
GSM7277415
ChIPmentation_GMP_IgG
GSM7277416
ChIPmentation_GMP_LMO2_rep1
GSM7277417
ChIPmentation_GMP_LMO2_rep2
GSM7277418
ChIPmentation_GMP_LMO2_rep3
GSM7277419
ChIPmentation_GMP_LYL1_rep1
GSM7277420
ChIPmentation_GMP_LYL1_rep2
GSM7277421
ChIPmentation_GMP_LYL1_rep3
GSM7277422
ChIPmentation_GMP_RUNX1_rep1
GSM7277423
ChIPmentation_GMP_RUNX1_rep2
GSM7277424
ChIPmentation_GMP_RUNX1_rep3
GSM7277425
ChIPmentation_GMP_TAL1_rep1
GSM7277426
ChIPmentation_GMP_TAL1_rep2
GSM7277427
ChIPmentation_GMP_TAL1_rep3
GSM7277428
ChIPmentation_MEP_ERG_rep1
GSM7277429
ChIPmentation_MEP_ERG_rep2
GSM7277430
ChIPmentation_MEP_ERG_rep3
GSM7277431
ChIPmentation_MEP_FLI1_rep1
GSM7277432
ChIPmentation_MEP_FLI1_rep2
GSM7277433
ChIPmentation_MEP_FLI1_rep3
GSM7277434
ChIPmentation_MEP_GATA2_rep1
GSM7277435
ChIPmentation_MEP_GATA2_rep2
GSM7277436
ChIPmentation_MEP_GATA2_rep3
GSM7277437
ChIPmentation_MEP_IgG
GSM7277438
ChIPmentation_MEP_LMO2_rep1
GSM7277439
ChIPmentation_MEP_LMO2_rep2
GSM7277440
ChIPmentation_MEP_LMO2_rep3
GSM7277441
ChIPmentation_MEP_LYL1_rep1
GSM7277442
ChIPmentation_MEP_LYL1_rep2
GSM7277443
ChIPmentation_MEP_LYL1_rep3
GSM7277444
ChIPmentation_MEP_RUNX1_rep1
GSM7277445
ChIPmentation_MEP_RUNX1_rep2
GSM7277446
ChIPmentation_MEP_RUNX1_rep3
GSM7277447
ChIPmentation_MEP_TAL1_rep1
GSM7277448
ChIPmentation_MEP_TAL1_rep2
GSM7277449
ChIPmentation_MEP_TAL1_rep3
GSM7277450
ChIPmentation_HSC_CTCF_rep1
GSM7277451
ChIPmentation_HSC_CTCF_rep2
GSM7277452
ChIPmentation_HSC_CTCF_rep3
GSM7277453
ChIPmentation_CMP_CTCF_rep1
GSM7277454
ChIPmentation_CMP_CTCF_rep2
GSM7277455
ChIPmentation_CMP_CTCF_rep3
GSM7277456
ChIPmentation_GMP_CTCF_rep1
GSM7277457
ChIPmentation_GMP_CTCF_rep2
GSM7277458
ChIPmentation_GMP_CTCF_rep3
GSM7277459
ChIPmentation_MEP_CTCF_rep1
GSM7277460
ChIPmentation_MEP_CTCF_rep2
GSM7277461
ChIPmentation_MEP_CTCF_rep3
GSM7277462
ChIPmentation_HSC_PU1_rep1
GSM7277463
ChIPmentation_HSC_PU1_rep2
GSM7277464
ChIPmentation_HSC_PU1_rep3
GSM7277465
ChIPmentation_CMP_PU1_rep1
GSM7277466
ChIPmentation_CMP_PU1_rep2
GSM7277467
ChIPmentation_CMP_PU1_rep3
GSM7277468
ChIPmentation_GMP_PU1_rep1
GSM7277469
ChIPmentation_GMP_PU1_rep2
GSM7277470
ChIPmentation_GMP_PU1_rep3
GSM7277471
ChIPmentation_MEP_PU1_rep1
GSM7277472
ChIPmentation_MEP_PU1_rep2
GSM7277473
ChIPmentation_MEP_PU1_rep3
GSM7277474
ChIPmentation_HSC_STAG2_rep1
GSM7277475
ChIPmentation_HSC_STAG2_rep2
GSM7277476
ChIPmentation_CMP_STAG2_rep1
GSM7277477
ChIPmentation_CMP_STAG2_rep2
GSM7277478
ChIPmentation_GMP_STAG2_rep1
GSM7277479
ChIPmentation_GMP_STAG2_rep2
GSM7277480
ChIPmentation_MEP_STAG2_rep1
GSM7277481
ChIPmentation_MEP_STAG2_rep2
GSM7277482
ChIPmentation_HSC_Pol2_rep1
GSM7277483
ChIPmentation_HSC_Pol2_rep2
GSM7277484
ChIPmentation_CMP_Pol2_rep1
GSM7277485
ChIPmentation_CMP_Pol2_rep2
GSM7277486
ChIPmentation_GMP_Pol2_rep1
GSM7277487
ChIPmentation_GMP_Pol2_rep2
GSM7277489
ChIPmentation_MEP_Pol2_rep1
GSM7277491
ChIPmentation_MEP_Pol2_rep2
GSM7277493
ChIPmentation_HSC_H3K27me3
GSM7277495
ChIPmentation_CMP_H3K27me3
GSM7277497
ChIPmentation_GMP_H3K27me3
GSM7277499
ChIPmentation_MEP_H3K27me3
GSM7277506
ChIP_HSC_H3K27ac
GSM7277507
ChIP_CMP_H3K27ac
GSM7277508
ChIP_GMP_H3K27ac
GSM7277509
ChIP_MEP_H3K27ac
GSM7277510
ChIP_HSC_H3K4me3
GSM7277511
ChIP_CMP_H3K4me3
GSM7277512
ChIP_GMP_H3K4me3
GSM7277513
ChIP_MEP_H3K4me3
GSM7277514
HiChIP_H3K27AC_CMP_rep1
GSM7277515
HiChIP_H3K27AC_CMP_rep2
GSM7277516
HiChIP_H3K27AC_HSC_rep1
GSM7277517
HiChIP_H3K27AC_HSC_rep2
GSM7277518
HiChIP_H3K27AC_GMP_rep1
GSM7277519
HiChIP_H3K27AC_GMP_rep2
GSM7277520
HiChIP_H3K27AC_MEP_rep1
GSM7277521
HiChIP_H3K27AC_MEP_rep2
GSM7286680
HiC_CMP_rep1
GSM7286681
HiC_CMP_rep2
GSM7286682
HiC_HSC_rep1
GSM7286683
HiC_HSC_rep2
GSM7286684
HiC_GMP_rep1
GSM7286685
HiC_GMP_rep2
GSM7286686
HiC_MEP_rep1
GSM7286687
HiC_MEP_rep2
This SuperSeries is composed of the following SubSeries:
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GSE231422
Genome-wide Transcription Factor binding maps reveal cell-specific changes in the regulatory architecture of human HSPC [ChIPmentation]
GSE231425
Genome-wide Transcription Factor binding maps reveal cell-specific changes in the regulatory architecture of human HSPC [ChIP-seq]
GSE231426
Genome-wide Transcription Factor binding maps reveal cell-specific changes in the regulatory architecture of human HSPC [HiChIP]
GSE231485
Genome-wide Transcription Factor binding maps reveal cell-specific changes in the regulatory architecture of human HSPC [HiC]
Relations
BioProject
PRJNA966119
Download family
Format
SOFT formatted family file(s)
SOFT
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MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE231486_RAW.tar
1.2 Gb
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