NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE231487 Query DataSets for GSE231487
Status Public on May 02, 2024
Title Liver-specific DICER1 syndrome model mice develop cystic liver tumors with defective primary cilia
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary DICER1 syndrome is a tumor predisposition syndrome caused by familial genetic mutations in DICER1. Pathogenic variants of DICER1 have been discovered in many rare cancers, including cystic liver tumors. However, the molecular mechanisms underlying liver lesions induced by these variants remain unclear. In the present study, we sought to gain a better understanding of the pathogenesis of these variants by generating a mouse model of liver-specific DICER1 syndrome. The mouse model developed bile duct hyperplasia with fibrosis, similar to congenital hepatic fibrosis, as well as cystic liver tumors resembling those in Caroli's syndrome, intrahepatic cholangiocarcinoma, and hepatocellular carcinoma. Interestingly, the mouse model of DICER1 syndrome showed abnormal formation of primary cilia in the bile duct epithelium, which is a known cause of bile duct hyperplasia and cyst formation. These results indicated that DICER1 mutations contribute to cystic liver tumors by inducing defective primary cilia. The mouse model generated in this study will be useful for elucidating the potential mechanisms of tumorigenesis induced by DICER1 variants and for obtaining a comprehensive understanding of DICER1 syndrome.
 
Overall design RNA profiles of liver from DICER1 syndrome model mouse. 4-weeks-old, female, two WT and two DICER1 syndrome model mice.
Web link https://pubmed.ncbi.nlm.nih.gov/38922876/
 
Contributor(s) Ohno S, Kuroda M
Citation(s) 38922876
Submission date May 02, 2023
Last update date Aug 05, 2024
Contact name Shin-ichiro Ohno
Organization name Tokyo Medical University
Department Molecular Pathology
Street address 6-1-1 Shinjuku
City Shinjuku-ku
State/province Tokyo
ZIP/Postal code 1608402
Country Japan
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (4)
GSM7286688 DICER1 mutant mouse liver #1
GSM7286689 DICER1 mutant mouse liver #2
GSM7286690 Wild-type mouse liver #1
Relations
BioProject PRJNA966139

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE231487_RAW.tar 62.3 Mb (http)(custom) TAR (of GTF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap