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Series GSE231491 Query DataSets for GSE231491
Status Public on Dec 20, 2023
Title Effect of Parenteral Trace Element Supplementation on RNA-sequencing Profile of Peripheral Blood in Peripartum Dairy Cows
Organism Bos taurus
Experiment type Expression profiling by high throughput sequencing
Summary The transition period is the most critical stage in the lactation cycle of dairy cattle. During this period, cows are subjected to high levels of oxidative stress. One way of managing this stress is through mineral supplementation with antioxidant micronutrients. The aim of this study was to evaluate the gene expression of transition dairy cows supplemented with the antioxidant trace elements copper (Cu), zinc (Zn), manganese (Mn) and selenium (Se). The study was carried out in a commercial Holstein dairy farm located in General Belgrano, province of Buenos Aires, Argentina. Cows (n=200) were randomly assigned to either a supplemented or a control group. Blood samples were obtained seven days after calving and used to determine superoxide dismutase and glutathione peroxidase activity, antioxidant capacity and thiobarbituric acid reactive substances. Additionally, RNA-sequencing analysis was performed. The oxidative stress index differed significantly between groups, despite only two differentially expressed genes which codify for second messengers (adjusted p value < 0.05). This would suggest that trace mineral supplementation of transition dairy cows would not induce changes in gene expression profiles in pathways associated with oxidative stress and immune function, since their expression is already high in response to the high oxidative stress levels and the dietary changes associated with this period. Nevertheless, considering the role of these minerals as cofactors, a higher availability in the supplemented group would increase antioxidant enzyme activity.
 
Overall design Transcriptomic profile of peripheral blood in Holstein cows in the transition period that had been supplemented and control animals
 
Contributor(s) Calcaterra F, Fernandez ME, Olivera LH, Guzman LA, Giovambattista G, Picco SJ
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Submission date May 02, 2023
Last update date Feb 20, 2024
Contact name Guillermo Giovambattista
E-mail(s) guillermogiovambattista@gmail.com
Phone 02214211799
Organization name CONICET-UNLP
Department Facultad de Ciencias Veterinarias
Lab IGEVET
Street address Calle 60 y 118 S/N
City La Plata
State/province Buenos Aires
ZIP/Postal code 1900
Country Argentina
 
Platforms (1)
GPL26012 Illumina NovaSeq 6000 (Bos taurus)
Samples (12)
GSM7286699 caso_1014
GSM7286700 caso_1090
GSM7286701 caso_3466
Relations
BioProject PRJNA966145

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Supplementary file Size Download File type/resource
GSE231491_1735-1674_QCsummary.xlsx 9.0 Kb (ftp)(http) XLSX
GSE231491_Calcaterra_et_al_biochemichal_determinations_and_productive_data.xlsx 42.2 Kb (ftp)(http) XLSX
GSE231491_metadata.docx.gz 9.3 Kb (ftp)(http) DOCX
GSE231491_raw_count_matrix_DE_analysis.xlsx 4.7 Mb (ftp)(http) XLSX
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Processed data are available on Series record

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