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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 11, 2024 |
| Title |
Identification of hepatocyte-primed biliary epithelial cells in the homeostatic liver by in vivo lentiviral gene transfer to mice and non-human primates [1] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
To investigate the differences in the trascriptome of mouse cholangiocytes marked with or without the Confetti reporter after induction of CreERT2-mediated recombination driven by Albumin promoter
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for mouse cholangiocytes traced trough tamoxifen-induced activation of CreERT2-mediated recombination of the Confetti reporter
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| Contributor(s) |
Cantore A, Milani M, Beretta S, Merelli I |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 12, 2023 |
| Last update date |
May 11, 2024 |
| Contact name |
Ivan Merelli |
| E-mail(s) |
ivan.merelli@itb.cnr.it
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| Phone |
+390226422600
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| Organization name |
Consiglio Nazionale delle Ricerche
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| Department |
Istituto di Tecnologie Biomediche
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| Lab |
Bioinformatics
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| Street address |
via F.lli Cervi 93
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| City |
Segrate |
| State/province |
Milano |
| ZIP/Postal code |
20090 |
| Country |
Italy |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (12)
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| GSM7329521 |
EpCAM, ConfettiNeg, 4 |
| GSM7329522 |
EpCAM, ConfettiNeg, 5 |
| GSM7329523 |
EpCAM, ConfettiNeg, 6 |
| GSM7329524 |
EpCAM, ConfettiPos, 1 |
| GSM7329525 |
EpCAM, ConfettiPos, 2 |
| GSM7329526 |
EpCAM, ConfettiPos, 3 |
| GSM7329527 |
EpCAM, ConfettiPos, 4 |
| GSM7329528 |
EpCAM, ConfettiPos, 5 |
| GSM7329529 |
EpCAM, ConfettiPos, 6 |
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| This SubSeries is part of SuperSeries: |
| GSE232372 |
Identification of hepatocyte-primed biliary epithelial cells in the homeostatic liver by in vivo lentiviral gene transfer to mice and non-human primates |
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| Relations |
| BioProject |
PRJNA971874 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE232369_featureCounts_results_corrected.txt.gz |
4.2 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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