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Series GSE233409 Query DataSets for GSE233409
Status Public on Jan 24, 2024
Title Dual RNA-sequencing of Fusarium Head Blight resistance in winter wheat
Organism Triticum aestivum
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we used dual RNA-sequencing to profile FHB-resistant AC Emerson, FHB-moderately AC Morley, and FHB-susceptible CDC Falcon winter wheat cultivars prior to and in response to Fusarium graminearum at 7 days post inoculation. Differential expression analyses revealed distinct defense responses between resistant and susceptible wheat cultivars including increased mechanical defense through lignin biosynthesis and increased deoxynivalenol (DON) detoxification through UDP-glycosyltransferase activity in resistant cultivars. Further, differential expression analysis in F. graminearum challenging these distinct cultivars revealed changes genes involved in trichothecene mycotoxin biosynthesis.
 
Overall design FHB-resistant AC Emerson, FHB-moderately resistant AC Morley and FHB-susceptible CDC Falcon spikelets at 0 and 7 days post inoculation with Fusarium graminearum
 
Contributor(s) Walker P, Henriquez MA
Citation(s) 38239218
Submission date May 25, 2023
Last update date Jan 24, 2024
Contact name Philip Walker
Organization name Agriculture and Agri-Food Canada
Street address 303 Main St
City Winnipeg
State/province Manitoba
ZIP/Postal code R3C 3G7
Country Canada
 
Platforms (1)
GPL18862 Illumina HiSeq 2500 (Triticum aestivum)
Samples (18)
GSM7427136 water inoculated spikelet in CDC Falcon 1
GSM7427137 water inoculated spikelet in CDC Falcon 2
GSM7427138 water inoculated spikelet in CDC Falcon 3
Relations
BioProject PRJNA976214

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE233409_Fusarium_count_data.txt.gz 202.4 Kb (ftp)(http) TXT
GSE233409_Wheat_count_data.txt.gz 1.9 Mb (ftp)(http) TXT
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