|
|
GEO help: Mouse over screen elements for information. |
|
Status |
Public on Jul 14, 2023 |
Title |
Effect of NleE effector on gene expression in HCT116 cells |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
To investigate the function of NleE in the regulation of host transcription, we established HCT116 cell lines stably expressing NleE. We performed toal RNA-seq and compared transcription of HCT116 cells with and without NleE expression.
|
|
|
Overall design |
Comparative gene expression profiling analysis of RNA-seq data for HCT 116 cells expressing NleE and HCT 116 cells with empty vector.
|
|
|
Contributor(s) |
Ren H, Ouyang X, Zhou L |
Citation(s) |
37379216 |
|
Submission date |
May 30, 2023 |
Last update date |
Jul 14, 2023 |
Contact name |
haiyan ren |
E-mail(s) |
hyren@scu.edu.cn
|
Phone |
+8617828458804
|
Organization name |
sichuan univerisity
|
Street address |
ren min nan lu san duan 17 hao
|
City |
Chengdu |
ZIP/Postal code |
610041 |
Country |
China |
|
|
Platforms (1) |
GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
Samples (6)
|
|
Relations |
BioProject |
PRJNA977601 |
Supplementary file |
Size |
Download |
File type/resource |
GSE233687_Expression.txt.gz |
4.1 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
Raw data are available in SRA |
Processed data are available on Series record |
|
|
|
|
|