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Series GSE234295 Query DataSets for GSE234295
Status Public on Mar 11, 2024
Title Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Jun 06, 2023
Last update date Mar 12, 2024
Contact name Dirk Schuebeler
Organization name Friedrich Miescher Institute for Biomedical Research
Street address Maulbeerstrasse 66
City Basel
ZIP/Postal code 4058
Country Switzerland
 
Platforms (4)
GPL16417 Illumina MiSeq (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (124)
GSM7458180 RNAseq_ESC_wt_A_1
GSM7458181 RNAseq_ESC_wt_A_2
GSM7458182 RNAseq_ESC_rsf1_ko_A_1
This SuperSeries is composed of the following SubSeries:
GSE234248 Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF [RNA-seq]
GSE234251 Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF [Mnase-seq]
GSE234268 Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF [ATAC-seq]
Relations
BioProject PRJNA980698

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234295_RAW.tar 3.9 Gb (http)(custom) TAR (of MCOOL, WIG)
SRA Run SelectorHelp
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