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| Status |
Public on Dec 19, 2023 |
| Title |
Genome-wide transcriptome analysis of the brain (ventral part of telenchephalon, hypothalamus and pituitary) of medaka (Oryzias latipes) kept under outdoor natural conditions over a period of two years |
| Organism |
Oryzias latipes |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Expression profile of the brain (ventral part of telenchephalon, hypothalamus and pituitary) of medaka (Oryzias latipes) kept under outdoor natural conditions were obtained by RNA-seq analysis. Monthly transcriptomes for two years identified 3,341 seasonally-oscillating genes.
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| Overall design |
To investigated the yearly expression profile of each gene in each season, samples were collected every month at around 8 pm (Japan Standard Time) for two years, from October 2015 to October 2017 from medaka kept under outdoor natural conditions. RNA-seq analysis was performed using these time-series samples.
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| Contributor(s) |
Yoshimura T |
| Citation(s) |
38109538 |
| |
| Submission date |
Jun 07, 2023 |
| Last update date |
Dec 19, 2023 |
| Contact name |
Takashi Yoshimura |
| E-mail(s) |
takashiy@agr.nagoya-u.ac.jp
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| Organization name |
Nagoya University
|
| Street address |
Furo-cho, Chikusa-ku
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| City |
Nagoya |
| ZIP/Postal code |
4648601 |
| Country |
Japan |
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| Platforms (1) |
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| Samples (50)
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| Relations |
| BioProject |
PRJNA981183 |
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