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| Status |
Public on Oct 02, 2023 |
| Title |
The impact of the SCFA crotonate on Candida albicans and macrophage transcriptomes |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The effects of the SCFA crotonate on fungal and host transcriptomes were addressed, following infection of mouse bone marrow-derived macrophages(BMDMs) with Candida albicans.
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| Overall design |
Macrophages were challenged with Candida albicans and fungal and macrophage samples taken at 1 and 3 h following the challenge.
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| Contributor(s) |
Verma J, Traven A, Tucey T |
| Citation(s) |
37929941 |
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| Submission date |
Jun 09, 2023 |
| Last update date |
Jan 01, 2024 |
| Contact name |
Rachael Turner |
| E-mail(s) |
rachael.turner@monash.edu
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| Organization name |
Monash University
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| Department |
Biochemistry and Molecular Biology
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| Street address |
Wellington Road
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| City |
Clayton |
| State/province |
Victoria |
| ZIP/Postal code |
3800 |
| Country |
Australia |
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| Platforms (1) |
| GPL21493 |
Illumina HiSeq 3000 (Mus musculus) |
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| Samples (12)
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| GSM7470679 |
1 hour, crotonate, rep1 |
| GSM7470680 |
1 hour, crotonate, rep2 |
| GSM7470681 |
1 hour, crotonate, rep3 |
| GSM7470682 |
3 hour, rep1 |
| GSM7470683 |
3 hour, rep2 |
| GSM7470684 |
3 hour, rep3 |
| GSM7470685 |
3 hour, crotonate, rep1 |
| GSM7470686 |
3 hour, crotonate, rep2 |
| GSM7470687 |
3 hour, crotonate, rep3 |
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| Relations |
| BioProject |
PRJNA982041 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE234554_candida_count.csv.gz |
410.8 Kb |
(ftp)(http) |
CSV |
| GSE234554_mouse_count.csv.gz |
1.6 Mb |
(ftp)(http) |
CSV |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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