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Series GSE234716 Query DataSets for GSE234716
Status Public on Jul 05, 2024
Title KMT2D regulates gene expression through regulating promoters/enhances upon glucose deprivation.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s)
  • Liu W, Cao H, Wang J, Elmusrati A et al. Histone-methyltransferase KMT2D deficiency impairs the Fanconi anemia/BRCA pathway upon glycolytic inhibition in squamous cell carcinoma. Nat Commun 2024 Aug 8;15(1):6755. PMID: 39117659
Submission date Jun 12, 2023
Last update date Aug 30, 2024
Contact name Cunyu Wang
E-mail(s) cwang@dentistry.ucla.edu
Phone 3108256317
Organization name UCLA
Department School of Dentistry
Lab CHS 56-200
Street address 10833 Le Conte Ave
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (2)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (29)
GSM7472489 KD_ct
GSM7472490 Kin_ct
GSM7472491 NGWT-H3K4me1
This SuperSeries is composed of the following SubSeries:
GSE234640 KMT2D regulates Fanconi anemia pathway genes through regulating promoters/enhances upon glucose deprivation (CHIPseq)
GSE234824 Whole exome sequencing of HNSCC PDX with KMT2D-inactivating mutation
GSE237454 Gene regulation profiling by KMT2D under different glucose conditions in HNSCC (RNAseq)
Relations
BioProject PRJNA982804

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234716_RAW.tar 2.8 Gb (http)(custom) TAR (of BCF, BW, NARROWPEAK, TXT)
SRA Run SelectorHelp

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