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| Status |
Public on Aug 12, 2013 |
| Title |
Effect of sc3 and sc4 on aerial hypha formation |
| Organism |
Schizophyllum commune |
| Experiment type |
Expression profiling by SAGE
|
| Summary |
In order to study changes in gene expression during mushroom development in Schizophyllum commune, genome wide gene expression was analysed in 4 developmental stages: vegetative mycelium, stage I aggregates, stage II primordia and mature mushrooms.
In order to study the effects of absence of expression of sc3 and sc4, genome-wide expression was analysed in a dikaryon in which those genes have been inactivated by targeted gene deletion.
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| Overall design |
5 samples:
- vegetative mycelium
- stage I aggregates
- stage II primordia
- mature mushrooms
- deltaSC3 deltaSC4 dikaryon
RNA was obtained from 3 biological replicates and pooled
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| |
|
| Contributor(s) |
Ohm R, de Jong J, Lugones L, Wosten H |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Aug 10, 2010 |
| Last update date |
Aug 12, 2013 |
| Contact name |
H.A.B. Wösten |
| Organization name |
Utrecht University
|
| Street address |
Padualaan 8
|
| City |
Utrecht |
| ZIP/Postal code |
3584 CH |
| Country |
Netherlands |
| |
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| Platforms (1) |
| GPL10299 |
SAGE:16:DpnII:Schizophyllum commune |
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| Samples (5)
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| Relations |
| BioProject |
PRJNA131761 |
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