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Series GSE235562 Query DataSets for GSE235562
Status Public on Jun 01, 2024
Title Impact of shear stretch and oxygen toxicity on pulmonary MSC of the preterm infant.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Bronchopulmonary dysplasia (BPD) represents one of the most important sequelae of preterm birth affecting more than 20% of infants born below 32 weeks. Mechanical ventilation exerting shear stress (cyclic mechanical stress, CMS) and oxygen toxicity (hyperoxia, Hox) mainly contribute to the pathogenesis of BPD. The study proposal aims to separate the impact of CMS and Hox on pulmonary mesenchymal stem cells (MSC) isolated from preterm infants participating in the DZL PROTECT-AIRR cohort study in a world-wide unique in vitro setting. The impact of rhythmic 2D and 3D stretch to MSC cell cultures alone and in combination with different fractions of oxygen is evaluated with respect to MSC phenotype, transcriptional regulation, protein alterations and paracrine secretion.
 
Overall design 6 groups with 8-16 biological replicates
 
Contributor(s) Wilhelm J, Behnke J, Erhardt H
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Submission date Jun 22, 2023
Last update date Jun 01, 2024
Contact name Jochen Wilhelm
Organization name Justus-Liebig University Giessen
Department Institute for Lung Health
Lab ILH Genomics
Street address Aulweg 132
City Giessen
State/province Hessen
ZIP/Postal code 35392
Country Germany
 
Platforms (1)
GPL20844 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Feature Number Version]
Samples (64)
GSM7505287 control_rep1
GSM7505288 control_rep2
GSM7505289 control_rep3
Relations
BioProject PRJNA986473

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235562_RAW.tar 450.9 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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