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Series GSE236523 Query DataSets for GSE236523
Status Public on Aug 30, 2023
Title CD44 connects autophagy decline and aging in the vascular endothelium
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The decline of endothelial autophagy is closely related to vascular senescence and disease, although the molecular mechanisms connecting these outcomes in vascular endothelial cells (VECs) remain unclear. Here, we identify a crucial role for CD44, a multifunctional adhesion molecule, in controlling autophagy and aging in VECs. The CD44 intercellular domain (CD44ICD) negatively regulates autophagy by reducing PIK3R4 and PIK3C3 levels and disrupting STAT3-dependent PtdIns3K complexes. CD44 and its homologue clec-31 are increased in aging vascular endothelium and Caenorhabditis elegans, respectively, suggesting that an age-dependent increase in CD44 induces autophagy decline and aging phenotypes. Accordingly, CD44 knockdown ameliorates age-associated phenotypes in VECs. The endothelium-specific CD44ICD knock-in mouse is shorter-lived, with VECs exhibiting obvious premature aging characteristics associated with decreased basal autophagy. Autophagy activation suppresses the premature aging of human and mouse VECs overexpressing CD44ICD, function conserved in the CD44 homologue clec-31 in C. elegans. Our work describes a mechanism coordinated by CD44 function bridging autophagy decline and aging.
 
Overall design We knock-down CD44 in HUVECs by siRNA (S1, S2). We then analyzed the differentially expressed autophagy related genes compared with control (SC) using the Affymetrix Human GeneChip® Gene1.0 ST platform. Array data was processed by Affymetrix Exon Array Computational Tool. No techinical replicates were performed.
 
Contributor(s) Zhang L, Yang P
Citation(s) 37684253
Submission date Jul 05, 2023
Last update date Sep 21, 2023
Contact name Lu Zhang
E-mail(s) zhanglu@haut.edu.cn
Organization name Henan University of Technology
Street address Henan University of Technology, Lianhua Street, Zhengzhou
City Zhengzhou
State/province Henan
ZIP/Postal code 450001
Country China
 
Platforms (1)
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (3)
GSM7549510 HUVECs, siControl
GSM7549511 HUVECs, siCD44-1
GSM7549512 HUVECs, siCD44-2
Relations
BioProject PRJNA991525

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236523_Processed_data.xlsx 19.0 Mb (ftp)(http) XLSX
GSE236523_RAW.tar 75.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

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