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GEO accession:
Series GSE236842
Query DataSets for GSE236842
Status
Public on Feb 29, 2024
Title
Transcriptomes of human iPSC-derived alveolar and airway cells in the micro-patterned culture plates and their responses to SARS-CoV-2 variant infection
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Jul 07, 2023
Last update date
Feb 29, 2024
Contact name
Shimpei Gotoh
Organization name
Kyoto University
Department
Center for iPS cell Research and Application
Lab
Gotoh Lab
Street address
53 Kawaharacho, Shogoin, Sakyo-ku
City
Kyoto
ZIP/Postal code
606-8507
Country
Japan
Platforms (2)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
GPL30173
NextSeq 2000 (Homo sapiens)
Samples (48)
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GSM7577904
LungProgenitor_1 [alveolar]
GSM7577905
LungProgenitor_2 [alveolar]
GSM7577906
LungProgenitor_3 [alveolar]
GSM7577907
Alveolar_Day8_HoechstLow_1 [alveolar]
GSM7577908
Alveolar_Day8_HoechstLow_2 [alveolar]
GSM7577909
Alveolar_Day8_HoechstLow_3 [alveolar]
GSM7577910
Alveolar_Day8_HoechstHigh_1 [alveolar]
GSM7577911
Alveolar_Day8_HoechstHigh_2 [alveolar]
GSM7577912
Alveolar_Day8_HoechstHigh_3 [alveolar]
GSM7577913
Alveolar_Day14_HoechstLow_1 [alveolar]
GSM7577914
Alveolar_Day14_HoechstLow_2 [alveolar]
GSM7577915
Alveolar_Day14_HoechstLow_3 [alveolar]
GSM7577916
Alveolar_Day14_HoechstHigh_1 [alveolar]
GSM7577917
Alveolar_Day14_HoechstHigh_2 [alveolar]
GSM7577918
Alveolar_Day14_HoechstHigh_3 [alveolar]
GSM7577919
LungProgenitor_1 [airway]
GSM7577920
LungProgenitor_2 [airway]
GSM7577921
LungProgenitor_3 [airway]
GSM7577922
Airway_Day7_HoechstLow_1 [airway]
GSM7577923
Airway_Day7_HoechstLow_2 [airway]
GSM7577924
Airway_Day7_HoechstLow_3 [airway]
GSM7577925
Airway_Day7_HoechstHigh_1 [airway]
GSM7577926
Airway_Day7_HoechstHigh_2 [airway]
GSM7577927
Airway_Day7_HoechstHigh_3 [airway]
GSM7577928
Alveolar_mock_1 [SARS-CoV-2]
GSM7577929
Alveolar_mock_2 [SARS-CoV-2]
GSM7577930
Alveolar_mock_3 [SARS-CoV-2]
GSM7577931
Alveolar_mock_4 [SARS-CoV-2]
GSM7577932
Alveolar_B.1.617.2_1 [SARS-CoV-2]
GSM7577933
Alveolar_B.1.617.2_2 [SARS-CoV-2]
GSM7577934
Alveolar_B.1.617.2_3 [SARS-CoV-2]
GSM7577935
Alveolar_B.1.617.2_4 [SARS-CoV-2]
GSM7577936
Alveolar_BA.1_1 [SARS-CoV-2]
GSM7577937
Alveolar_BA.1_2 [SARS-CoV-2]
GSM7577938
Alveolar_BA.1_3 [SARS-CoV-2]
GSM7577939
Alveolar_BA.1_4 [SARS-CoV-2]
GSM7577940
Airway_mock_1 [SARS-CoV-2]
GSM7577941
Airway_mock_2 [SARS-CoV-2]
GSM7577942
Airway_mock_3 [SARS-CoV-2]
GSM7577943
Airway_mock_4 [SARS-CoV-2]
GSM7577944
Airway_B.1.617.2_1 [SARS-CoV-2]
GSM7577945
Airway_B.1.617.2_2 [SARS-CoV-2]
GSM7577946
Airway_B.1.617.2_3 [SARS-CoV-2]
GSM7577947
Airway_B.1.617.2_4 [SARS-CoV-2]
GSM7577948
Airway_BA.1_1 [SARS-CoV-2]
GSM7577949
Airway_BA.1_2 [SARS-CoV-2]
GSM7577950
Airway_BA.1_3 [SARS-CoV-2]
GSM7577951
Airway_BA.1_4 [SARS-CoV-2]
This SuperSeries is composed of the following SubSeries:
GSE236839
Micro-patterned culture of iPSC-derived alveolar epithelial cells [alveolar]
GSE236840
Micro-patterned culture of iPSC-derived airway epithelial cells [airway]
GSE236841
Human iPSC-derived pulmonary epithelial cells infected with SARS-CoV-2 variants in the micro-patterned culture plates [SARS-CoV-2]
Relations
BioProject
PRJNA992499
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Format
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Supplementary data files not provided
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