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Series GSE237035 Query DataSets for GSE237035
Status Public on Dec 31, 2023
Title Regulation of the three-dimensional chromatin organization by transposable elements in pig spleen
Organism Sus scrofa
Experiment type Other
Summary We performed in situ Hi-C experiments to determine the 3D chromatin organization in pig spleen
 
Overall design In situ Hi-C data are generated for pig spleen with two biological replicates
 
Contributor(s) Li Y, Fan H, Qin W, Bao W, Sun M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 11, 2023
Last update date Dec 31, 2023
Contact name yu zhuo li
E-mail(s) MX120210971@stu.yzu.edu.cn
Phone 15066340531
Organization name Yangzhou University
Department veterinary
Lab sun
Street address No. 88, daxuenanlu Road
City Yangzhou
State/province 江苏省
ZIP/Postal code 225009
Country China
 
Platforms (1)
GPL29847 DNBSEQ-G400 (Sus scrofa)
Samples (2)
GSM7593322 Hi-C_pig_spleen_r1
GSM7593323 Hi-C_pig_spleen_r2
Relations
BioProject PRJNA993593

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE237035_TAD.bed.gz 12.3 Kb (ftp)(http) BED
GSE237035_inter_30.hic 2.7 Gb (ftp)(http) HIC
GSE237035_loop.bedpe.gz 172.0 Kb (ftp)(http) BEDPE
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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