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Series GSE23859 Query DataSets for GSE23859
Status Public on Sep 01, 2010
Title Regional Immune Response to Trichostrongylis colubriformis - Gene Expression during the Development of Immunity
Organism Ovis aries
Experiment type Expression profiling by array
Summary Afferent Lymph was collected over a 8 week period from up to 5 pen raised, nematode naïve, outbreed Romney sheep (Tag No’s 1001, 1002, 1003, 1004, 1006). During this time a Pre-Infection sample was collected, the sheep were immunised by 3 truncated (2 week) T. colubiformis infections (40,000 Tc L3, Immunising Infections 1-3). The treatment regime (shown below) will enable us to determine changes in gene expression during the development of immunity
 
Overall design The overall design is summarised in the below table.
 
Contributor(s) Knight J, Pernthaner T, Hein W
Citation(s) 20950493
Submission date Aug 27, 2010
Last update date Sep 18, 2012
Contact name Alan Francis McCulloch
E-mail(s) alan.mcculloch@agresearch.co.nz
Phone 64 3 4899080
Organization name AgResearch NZ
Street address Invermay
City Puddle Alley
State/province Mosgiel
ZIP/Postal code n/a
Country New Zealand
 
Platforms (1)
GPL4072 11K Ovita Ovine Array print 70
Samples (13)
GSM588296 70-9
GSM588381 70-17
GSM588383 70-11
This SubSeries is part of SuperSeries:
GSE23890 Regional Immune Response to Trichostrongylis colubriformis in Sheep
Relations
BioProject PRJNA133147

Data table header descriptions
ID
slide
Cy5 red sheep
Cy 3 green sheep
Rev
Cy 5 red treatment
Cy 3 green treatment
sheep Pre-Infection pool
sheep Immunising Infection 1 - week 1 pool
sheep Immunising Infection 2 - week 1 pool
sheep Immunising Infection 3 - week 1 pool
block

Data table
ID slide Cy5 red sheep Cy 3 green sheep Rev Cy 5 red treatment Cy 3 green treatment sheep Pre-Infection pool sheep Immunising Infection 1 - week 1 pool sheep Immunising Infection 2 - week 1 pool sheep Immunising Infection 3 - week 1 pool block
1261 70-9 1001-6 1001-6 0 Immunising Infect 1 Pre-Infection 1001-6 1001-6 1
1230 70-17 1001-6 1001-6 1 Pre-Infection Immunising Infect 1 1001-6 1001-6 1
866 70-11 1001-6 1001-6 0 Immunising Infect 2 Pre-Infection 1001-6 1001-6 2
1231 70-18 1001-6 1001-6 1 Pre-Infection Immunising Infect 2 1001-6 1001-6 2
729 70-1 1001-6 1001-6 0 Immunising Infect 3 Pre-Infection 1001-6 1001-6 3
730 70-2 1001-6 1001-6 1 Pre-Infection Immunising Infect 3 1001-6 1001-6 3
868 70-14 1001-6 1001-6 0 Immunising Infect 2 Immunising Infect 1 1001-6 1001-6 4
1234 70-19 1001-6 1001-6 0 Immunising Infect 2 Immunising Infect 1 1001-6 1001-6 4
1265 70-22 1001-6 1001-6 1 Immunising Infect 1 Immunising Infect 2 1001-6 1001-6 4
1232 70-20 1001-6 1001-6 0 Immunising Infect 3 Immunising Infect 2 1001-6 1001-6 5
1266 70-23 1001-6 1001-6 1 Immunising Infect 2 Immunising Infect 3 1001-6 1001-6 5
1233 70-21 1001-6 1001-6 0 Immunising Infect 3 Immunising Infect 1 1001-6 1001-6 6
1267 70-24 1001-6 1001-6 1 Immunising Infect 1 Immunising Infect 3 1001-6 1001-6 6

Total number of rows: 13


Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided
Processed data included within Sample table

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