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Series GSE239995 Query DataSets for GSE239995
Status Public on Oct 11, 2023
Title The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC
Organisms Homo sapiens; human gammaherpesvirus 4
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 37889078
Submission date Aug 03, 2023
Last update date Dec 22, 2023
Contact name Italo Tempera
E-mail(s) itempera@wistar.org
Organization name The Wistar Institute
Street address 3601 Spruce Street
City Philadelphia
ZIP/Postal code 10194
Country USA
 
Platforms (2)
GPL23185 Illumina HiSeq 2500 (Homo sapiens; Human gammaherpesvirus 4)
GPL25190 Illumina HiSeq 2500 (Human gammaherpesvirus 4)
Samples (29)
GSM7679478 SNU719 H3K27ac ChIP-seq rep1
GSM7679479 SNU719 H3K27ac ChIP-seq rep2
GSM7679480 SNU719 H3K4me1 ChIP-seq rep1
This SuperSeries is composed of the following SubSeries:
GSE239987 The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [ChIP-seq]
GSE239989 The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [HiC]
GSE239992 The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [HiChIP]
Relations
BioProject PRJNA1001883

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE239995_RAW.tar 41.0 Mb (http)(custom) TAR (of BEDPE, BW, NARROWPEAK, TXT)
SRA Run SelectorHelp

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