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Series GSE240882 Query DataSets for GSE240882
Status Public on Sep 13, 2023
Title Molecular characterization of the sea urchin larva photosensory system: Insights into the evolution of a Go-Opsin positive neuronal population
Organism Strongylocentrotus purpuratus
Experiment type Expression profiling by high throughput sequencing
Summary Sea urchin larvae possess a group of photoreceptor cells (PRCs) deploying a Go-Opsin (Opsin3.2). In this study, we investigate investigate the molecular signature of the Sp-Opsin3.2 cells using single cell transcriptomics.
 
Overall design Generation, analysis and integration of single cell RNA-seq data of 5 dpf Strongylocentrotus purpuratus larva.
 
Contributor(s) Maria C, Periklis P, Rossella A, Danila V, Maria Ina A
Citation(s) 37681865
Submission date Aug 15, 2023
Last update date Sep 13, 2023
Contact name Maria Ina Arnone
E-mail(s) miarnone@szn.it
Organization name Stazione Zoologica Anton Dohrn
Department Biology and Evolution of Marine Organisms
Street address Villa Comunale 1
City Napoli
State/province NA
ZIP/Postal code 80121
Country Italy
 
Platforms (1)
GPL23218 Illumina NextSeq 500 (Strongylocentrotus purpuratus)
Samples (2)
GSM7711255 Sp_5dpf_1_scRNAseq
GSM7711256 Sp_5dpf_2_scRNAseq
Relations
BioProject PRJNA1005635

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE240882_Sp_pluteus_harmonized_named.rds.gz 415.9 Mb (ftp)(http) RDS
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Raw data are available in SRA
Processed data are available on Series record

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