 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 01, 2010 |
| Title |
Expression and methylation analyses of HPV(-) and HPV(+) squamous cell carcinoma cell lines |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
Expression profiling by array
Methylation profiling by genome tiling array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
21613826 |
| |
| Submission date |
Sep 12, 2010 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Jung Kim |
| E-mail(s) |
junghk@umich.edu
|
| Organization name |
University of Michigan
|
| Street address |
1420 Washington Heights
|
| City |
Ann Arbor |
| State/province |
MI |
| ZIP/Postal code |
48109 |
| Country |
USA |
| |
|
| Platforms (9)
|
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
| GPL4910 |
[Hs35b_P01R] Affymetrix Human Tiling 2.0R Set, Array 1 |
| GPL4911 |
[Hs35b_P02R] Affymetrix Human Tiling 2.0R Set, Array 2 |
| GPL4912 |
[Hs35b_P03R] Affymetrix Human Tiling 2.0R Set, Array 3 |
| GPL4913 |
[Hs35b_P04R] Affymetrix Human Tiling 2.0R Set, Array 4 |
| GPL4914 |
[Hs35b_P05R] Affymetrix Human Tiling 2.0R Set, Array 5 |
| GPL4915 |
[Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6 |
| GPL4916 |
[Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7 |
| GPL8490 |
Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) |
|
| Samples (36)
|
| GSM593024 |
CaSki HPV(+), methylation |
| GSM593029 |
SCC4 HPV(-), expression |
| GSM593030 |
SCC74A HPV(-), expression |
| GSM593031 |
SCC47 HPV(+), expression |
| GSM593032 |
CaSki HPV(+), expression |
| GSM593033 |
SCC4 HPV(-), MeDIP-ChIP, array A |
| GSM593034 |
SCC4 HPV(-), MeDIP-ChIP, array B |
| GSM593035 |
SCC4 HPV(-), MeDIP-ChIP, array C |
| GSM593036 |
SCC4 HPV(-), MeDIP-ChIP, array D |
| GSM593037 |
SCC4 HPV(-), MeDIP-ChIP, array E |
| GSM593038 |
SCC4 HPV(-), MeDIP-ChIP, array F |
| GSM593039 |
SCC4 HPV(-), MeDIP-ChIP, array G |
| GSM593040 |
SCC74A HPV(-), MeDIP-ChIP, array A |
| GSM593041 |
SCC74A HPV(-), MeDIP-ChIP, array B |
| GSM593042 |
SCC74A HPV(-), MeDIP-ChIP, array C |
| GSM593043 |
SCC74A HPV(-), MeDIP-ChIP, array D |
| GSM593044 |
SCC74A HPV(-), MeDIP-ChIP, array E |
| GSM593045 |
SCC74A HPV(-), MeDIP-ChIP, array F |
| GSM593046 |
SCC74A HPV(-), MeDIP-ChIP, array G |
| GSM593047 |
SCC47 HPV(+), MeDIP-ChIP, array A |
| GSM593048 |
SCC47 HPV(+), MeDIP-ChIP, array B |
| GSM593049 |
SCC47 HPV(+), MeDIP-ChIP, array C |
| GSM593050 |
SCC47 HPV(+), MeDIP-ChIP, array D |
| GSM593051 |
SCC47 HPV(+), MeDIP-ChIP, array E |
| GSM593052 |
SCC47 HPV(+), MeDIP-ChIP, array F |
| GSM593053 |
SCC47 HPV(+), MeDIP-ChIP, array G |
| GSM593054 |
CaSki HPV(+), MeDIP-ChIP, array A |
| GSM593055 |
CaSki HPV(+), MeDIP-ChIP, array B |
| GSM593056 |
CaSki HPV(+), MeDIP-ChIP, array C |
| GSM593057 |
CaSki HPV(+), MeDIP-ChIP, array D |
| GSM593058 |
CaSki HPV(+), MeDIP-ChIP, array E |
| GSM593059 |
CaSki HPV(+), MeDIP-ChIP, array F |
| GSM593060 |
CaSki HPV(+), MeDIP-ChIP, array G |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE24087 |
Epigenome analysis in HPV(-) and HPV(+) squamous cell carcinoma cell lines |
| GSE24089 |
Expression data from HPV(-) and HPV(+) squamous cell carcinoma cell lines |
| GSE24090 |
Genome-wide methylation analysis in HPV(-) and HPV(+) squamous cell carcinoma cell lines |
|
| Relations |
| BioProject |
PRJNA130221 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE24091_RAW.tar |
693.8 Mb |
(http)(custom) |
TAR (of CEL) |
|
|
|
|
 |
Less...
More...