|
| Status |
Public on Sep 17, 2011 |
| Title |
Genome-wide H3K9 acetylation state before and after VPA treatment |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Genome-wide maps of the H3K9 acetylation state in embryonic stem cells (ESCs) before and after treatment with low levels of the histone deacetylase (HDAC) inhibitor valproic acid (VPA).
|
| |
|
| Overall design |
ChIP-seq for 3 samples: untreated E14 cells, cells treated with VPA for 4 hrs and cells treated with VPA for 16 hrs. Unprecipitated DNA was used as the input control (Input).
|
| |
|
| Contributor(s) |
Hezroni H, Meshorer E |
| Citation(s) |
21849501, 21941115 |
| |
| Submission date |
Sep 17, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Eran Meshorer |
| E-mail(s) |
meshorer@cc.huji.ac.il
|
| Phone |
+972-2-6585161
|
| Fax |
+972-2-6586073
|
| URL |
http://meshorerlab.huji.ac.il/
|
| Organization name |
The Hebrew University of Jerusalem
|
| Department |
Genetics
|
| Lab |
Stem cell chromatin
|
| Street address |
Edmond J. Safra campus
|
| City |
Jerusalem |
| ZIP/Postal code |
91904 |
| Country |
Israel |
| |
|
| Platforms (1) |
| GPL9318 |
AB SOLiD System 3.0 (Mus musculus) |
|
| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE23958 |
Gene expression and H3K9ac genome-wide maps following HDAC inhibition in mouse ES cells |
|
| Relations |
| SRA |
SRP005133 |
| BioProject |
PRJNA133743 |
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