NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE246454 Query DataSets for GSE246454
Status Public on Oct 31, 2023
Title Transcriptome analysis reveals the mechanism of action of tobacco NtAN3 in regulating leaf size formation
Organism Nicotiana tabacum
Experiment type Expression profiling by high throughput sequencing
Summary Tobacco (Nicotiana tabacum L.) is an important cash crop, and the size of its leaves significantly influences both yield and quality. However, the upper part of tobacco leaves, due to its dense tissue structure, often faces issues such as narrow and thick leaves during the production of roasted cigarettes. These problems have a severe impact on the yield and quality of the upper leaf. Although the mechanism of leaf size regulation in Arabidopsis thaliana has been extensively studied, it remains unclear for tobacco. Therefore, this research aimed to investigate the role of the NtAN3 gene in regulating tobacco leaf size by utilizing the NC82 variety. The researchers created both an overexpression mutant (G27) and a silencing mutant (M21) of the NtAN3 gene and examined their impact on leaf size using cell morphology observation and transcriptome analysis. These research findings offer valuable insights for molecular breeding aimed at improving tobacco yield and enhancing the availability of upper leaves.
 
Overall design 9 samples were analyzed, including 3 plant materials, each with three replicates.
 
Contributor(s) Yang S
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 27, 2023
Last update date Oct 31, 2023
Contact name Renxiang Liu
E-mail(s) rxliu@gzu.edu.cn
Organization name Guizhou University
Street address Huaxi
City Guiyang
State/province Guizhou
ZIP/Postal code 550025
Country China
 
Platforms (1)
GPL29390 Illumina NovaSeq 6000 (Nicotiana tabacum)
Samples (9)
GSM7869077 EFL132491
GSM7869078 EFL132490
GSM7869079 EFL132489
Relations
BioProject PRJNA1032954

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE246454_all_express.txt.gz 2.4 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap