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Series GSE247023 Query DataSets for GSE247023
Status Public on Nov 14, 2023
Title Advancing Cell Therapies: Single-Cell Profiling in Rhesus Macaque Plasma B Cells
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary Engineered long lived plasma cells have the potential to be a new area of cell therapy. A key step in developing this cell therapy is testing in a model with an intact immune system similar to humans. To that end, we have developed methods to purify, expand, and differentiate non-human primate (NHP; rhesus macaque) B cells ex vivo. We consistently achieved 10-fold expansion of NHP B cells using a readily available commercial supplement. After only seven days in culture, large percentages of cells in NHP B cell cultures were differentiated. These cells expressed surface markers found in human antibody secreting cells (CD38 and CD138) and secreted immunoglobulin G. From single cell transcriptome analysis of NHP, we verified the presence of plasma cell markers commonly shared with humans, and have unearthed less recognized markers such as CD59 and CD79A. In addition, we identified unique NHP plasma cell markers that are absent in humans including the immune checkpoint molecule CD274 (PD-L1, Programmed Death-Ligand 1). Furthermore, we found that MHC class I molecules were upregulated in NHP plasma cells, in contrast to the pattern observed in humans. Lastly, we also identified the serotypes (AAVD-J) and established the conditions for efficient transduction of NHP B cells with AAV vectors, achieving an editing rate of approximately 60%. We envision that this work will accelerate proof-of-concept in vivo studies using engineered protein-secreting B cells in the NHP model.
 
Overall design Ex vivo differentiated B cells day 7
 
Contributor(s) Cheng RY, James R
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Submission date Nov 04, 2023
Last update date Nov 15, 2023
Contact name Rene Cheng
E-mail(s) rene271828@gmail.com
Organization name Seattle children research institute
Street address 1900 9th AVE
City Seattle
State/province WA
ZIP/Postal code 98101
Country USA
 
Platforms (1)
GPL32833 NextSeq 2000 (Macaca mulatta)
Samples (2)
GSM7882245 PCs, mRNA-derived cDNA [20210910_SK_1_633_S2]
GSM7882246 PCs, mRNA-derived cDNA [20210910_SK_1_669_S1]
Relations
BioProject PRJNA1035771

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Supplementary file Size Download File type/resource
GSE247023_RAW.tar 17.7 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA

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