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| Status |
Public on Oct 19, 2010 |
| Title |
Heterochronic Evolution Reveals Modular Timing Changes in Budding Yeast Transcriptomes (Mutation Accumulation Lines) |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by array
|
| Summary |
45 genome-wide microarray measurements for 23 mutation accumulation lines grown in YPD liquid culture
MA lines obtained by single-colony transfer on YPD plates for 600 generations, starting from a BY4741 derived strain (see Zeyl C, DeVisser JA: Estimates of the rate and distribution of fitness effects of spontaneous mutation in Saccharomyces cerevisiae. Genetics 2001, 157:53–61)
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| |
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| Overall design |
Two biological replicates for each strain in a common reference design (no dye-swap)
|
| Web link |
http://kim.bio.upenn.edu/software/yeast-cdc.shtml
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| |
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| Contributor(s) |
Simola DF, Murphy H |
| Citation(s) |
20969771 |
| |
| Submission date |
Oct 18, 2010 |
| Last update date |
Mar 22, 2012 |
| Contact name |
Daniel Francis Simola |
| E-mail(s) |
simola@mail.med.upenn.edu
|
| Organization name |
University of Pennsylvania
|
| Department |
Cell and Developmental Biology
|
| Lab |
Shelley L. Berger
|
| Street address |
1041 BRB II/III
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL11064 |
J.Kim Yeast Operon (2005,2006,2007) |
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| Samples (23)
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| This SubSeries is part of SuperSeries: |
| GSE24772 |
Heterochronic Evolution Reveals Modular Timing Changes in Budding Yeast Transcriptomes |
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| Relations |
| BioProject |
PRJNA133379 |
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