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Series GSE24860 Query DataSets for GSE24860
Status Public on Nov 15, 2010
Title Expression analysis of Streptococcus pyogenes NZ131 serR-
Organism Streptococcus pyogenes NZ131
Experiment type Expression profiling by genome tiling array
Summary Whole genone expression profile comparing wild-type NZ131 to serR deletion mutant, grown in C-medium
Mutants and interpretation are described further in the manuscript to be submitted: LaSarre and Federle, 2010. Title: Regulation and Consequence of Serine Catabolism in Streptococcus pyogenes.
 
Overall design A two chip study using total RNA recovered from three separate wild-type cultures of Streptococcus pyogenes NZ131 and three separate mutant cultures of Streptococcus pyogenes NZ131 seR-, pooled following RNA extraction
 
Contributor(s) LaSarre B, Federle MJ
Citation(s) 21317320
Submission date Oct 21, 2010
Last update date May 22, 2012
Contact name Michael J Federle
E-mail(s) mfederle@uic.edu
Organization name University of Illinois at Chicago
Department Microbiology & Imm. / Cntr Pharm Biotech
Street address 900 S Ashland Ave. MC870
City Chicago
State/province IL
ZIP/Postal code 60607
Country USA
 
Platforms (1)
GPL15576 NimbleGen Streptococcus pyogenes NZ131 intergenic array [090910_MF_S_pyo_NZ131_expr]_gene-level version
Samples (2)
GSM611387 NZ131
GSM611388 BNL100
Relations
BioProject PRJNA132115

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24860_BNL100_vs_NZ131_Expr_Ratio_RMA.txt.gz 302.2 Kb (ftp)(http) TXT
GSE24860_RAW.tar 6.7 Mb (http)(custom) TAR (of CALLS, PAIR)
Processed data included within Sample table
Processed data provided as supplementary file
Processed data are available on Series record

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