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Series GSE248737 Query DataSets for GSE248737
Status Public on Dec 21, 2023
Title ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://www.sciencedirect.com/science/article/pii/S2211124723016741?via%3Dihub
 
Citation(s) 38206813
Submission date Nov 27, 2023
Last update date Feb 19, 2024
Contact name Mo Zhang
E-mail(s) zhangmo@alumni.sjtu.edu.cn
Organization name Shanghai Jiaotong University
Street address 800 Dongchuan Road
City Shanghai
ZIP/Postal code 200240
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (3)
GSM7919212 WT_H3K27me3,ChIP
GSM7919279 CTCF-AID_RNA-seq
GSM7919280 CTCFd_RNA-seq
This SuperSeries is composed of the following SubSeries:
GSE248731 ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry (ChIP-Seq)
GSE248736 ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry (RNA-Seq)
Relations
BioProject PRJNA1045673

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE248737_RAW.tar 198.0 Mb (http)(custom) TAR (of BROADPEAK, BW)
SRA Run SelectorHelp

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