|
| Status |
Public on Dec 01, 2023 |
| Title |
EWSR1::ATF1 Orchestrates the Clear Cell Sarcoma Transcriptome in Human Tumors and A Mouse Genetic Model [ChIP-Seq 2] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
A particular fusion protein that drives the rare, but deadly pediatric cancer, clear cell sarcoma. The fusion protein was expressed in mice, leading to the formation of similar tumors as those it causes in humans. This permitted the study of fusion protein function in these tumors.
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| |
|
| Overall design |
Chromatin immunoprecipitation sequencing (chip-seq) for H3K27ac with Abcam ab4279 anti-H3K27ac in SU-CCS-1
|
| |
|
| Contributor(s) |
Ozenberger BB, Li L, Jones KB |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 27, 2023 |
| Last update date |
Dec 01, 2023 |
| Contact name |
Li Li |
| E-mail(s) |
li.li@hci.utah.edu
|
| Phone |
3467174255
|
| Organization name |
University of Utah
|
| Street address |
201 PRESIDENTS CIRCLE
|
| City |
Salt Lake City |
| State/province |
Utah |
| ZIP/Postal code |
84112 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE248753 |
EWSR1::ATF1 Orchestrates the Clear Cell Sarcoma Transcriptome in Human Tumors and A Mouse Genetic Model |
|
| Relations |
| BioProject |
PRJNA1045697 |
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