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Series GSE24933 Query DataSets for GSE24933
Status Public on Dec 10, 2010
Title Genome-wide mapping of the transcription factor GABP-alpha binding in human CD34+CD133+ hematopoietic progenitor cells.
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We used ChIP-Seq to map GABP-alpha binding sites in human hematopoietic progenitor cells (HPCs). Coupled with functional assays using GABP-alpha deficient mouse model and bioinformatics analysis, we systematically determined a transcriptional module controlled by GABP in HPCs.
Overall design Examination of the role of GABP in hematopoietic stem cells
Contributor(s) Yu S, Jothi R, Zhao K, Xue H
Citation(s) 21139080
Submission date Oct 26, 2010
Last update date May 15, 2019
Contact name Raja Jothi
Organization name National Institutes of Health
Department National Institute of Environmental Health Sciences
Lab Systems Biology
Street address 111 TW Alexander Drive; A314
City RTP
State/province NC
ZIP/Postal code 27709
Country USA
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (2)
GSM612960 HPC GABPa ChIP-Seq
GSM612961 HPC control IgG ChIP-Seq
SRA SRP003903
BioProject PRJNA131925

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24933_RAW.tar 77.6 Mb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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