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Series GSE24969 Query DataSets for GSE24969
Status Public on Jul 11, 2011
Title Genome -wide identification of SCL's target genes in Megakaryocyte progenitors
Organism Mus musculus
Experiment type Expression profiling by array
Summary Megakaryopoiesis is a complex process that involves major cellular changes and relies on controlled coordination of cellular proliferation and differentiation. These mechanisms are orchestrated in part by transcriptional regulators. The key hematopoietic transcription factor SCL/TAL1 is required for specification of the megakaryocytic lineage from hematopoietic progenitors. Here, we report that it also critically controls terminal megakaryocyte maturation. In vivo depletion of SCL specifically in the megakaryocytic lineage affects all key attributes of megakaryocyte progenitors (MkPs), namely proliferation, ploidisation, cytoplasmic maturation, as well as platelet production. Genome-wide expression analysis reveals increased expression of the cell cycle regulator p21 in Scl-deleted MkPs. Importantly, P21 knockdown-mediated rescue assays in Scl-deleted MkPs show full restoration of cell cycle progression and partial rescue of the nuclear and cytoplasmic maturation defects. Therefore, SCL-mediated transcriptional control of p21 is critical for maturation of MkPs. Our study provides a mechanistic link between one of the major hematopoietic transcriptional regulators, cell cycle progression and megakaryocytic differentiation.
 
Overall design Total RNA extracted from control TGPF4-CRE;SCL wt/wt sorted MK progenitors was compared to total RNA extracted from TGPF4-CRE;SCL fl/fl MK progenitors cells where Scl was completely excised
 
Contributor(s) Chagraoui H, Soneji S, Porcher C
Citation(s) 21596846
Submission date Oct 27, 2010
Last update date Jan 18, 2013
Contact name Hedia Chagraoui
E-mail(s) hedia.chagraoui@imm.ox.ac.uk
Phone 00441865222309
Organization name Weatherall Institute of Molecular Medicine
Department Molecular Hematology Unit
Lab PORCHER/VYAS lab
Street address john radcliffe hospital headley way headington
City Oxford
ZIP/Postal code OX3 9DS
Country United Kingdom
 
Platforms (1)
GPL6105 Illumina mouse-6 v1.1 expression beadchip
Samples (6)
GSM613459 TG +/+ 1
GSM613460 TG +/+ 2
GSM613461 TG +/+ 3
Relations
BioProject PRJNA131897

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24969_RAW.tar 5.2 Mb (http)(custom) TAR
GSE24969_non-normalized.txt.gz 1.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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