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Series GSE250039 Query DataSets for GSE250039
Status Public on Dec 31, 2023
Title Liver transcriptome of an LPS infusion model for porcine sepsis
Organism Sus scrofa
Experiment type Expression profiling by high throughput sequencing
Summary Sepsis is a life-threatening organ dysfunction resulting from a dysregulated host response to infection. This is best studied in humans and various mouse models, however finding sof these models to not always translate easy to the clinic. In order to improve this transfer, and because sepsis also plays a significant role in vetrenairy medicine, we use the pig as a model organism in sepsis research. We compare two modes of porcine sepsis iduction: fecal infusion and LPS infusion and also compare thse o wha we can find in mice
 
Overall design 2 conditions LPS and PBS (controls) each with 3 biological replicates
 
Contributor(s) Halimi F, Vanderhaeghen T, Timmermans S, Garcia B, Vandewalle J, Herpain A, Dhont L, Croubels S, Libert C
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Submission date Dec 12, 2023
Last update date Dec 31, 2023
Contact name Steven Timmermans
Organization name VIB-UGent
Street address Technologiepark 71
City Gent
ZIP/Postal code 9052
Country Belgium
 
Platforms (1)
GPL26351 Illumina NovaSeq 6000 (Sus scrofa)
Samples (6)
GSM7971869 Liver_LPS-1
GSM7971870 Liver_LPS-2
GSM7971871 Liver_LPS-3
Relations
BioProject PRJNA1051645

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE250039_counts.txt.gz 306.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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