|
| Status |
Public on May 17, 2011 |
| Title |
h3k27me3_cvi-Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome variation profiling by genome tiling array
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
a2e_heterosis - h3k27me3_cvi - Arabidopsis thaliana accessions (Col-0, C24 and Cvi) and their hybrid were used to investigate the dynamics of the epigenome after intraspecific hybridization between - H3K27me3 profiling in Cvi seedlings
|
| |
|
| Overall design |
4 dye-swap - chip-chip
|
| Web link |
http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=408
|
| |
|
| Contributor(s) |
Colot V, Roudier F, Martin-Magniette M |
| Citation(s) |
21554454 |
| |
| Submission date |
Nov 01, 2010 |
| Last update date |
Mar 22, 2012 |
| Contact name |
François ROUDIER |
| E-mail(s) |
francois.roudier@ens-lyon.fr
|
| Organization name |
Ecole Normale Supérieure de Lyon
|
| Department |
Biologie
|
| Lab |
RDP
|
| Street address |
46 Allée d'Italie
|
| City |
Lyon |
| ZIP/Postal code |
69364 |
| Country |
France |
| |
|
| Platforms (2) |
| GPL10919 |
Custom NimbleGen A. thaliana ChIP-chip tiling design AT7v1.1 |
| GPL10920 |
Custom NimbleGen A. thaliana ChIP-chip tiling design AT7v1.2 |
|
| Samples (8)
|
| GSM615065 |
12001202Cvi - H3K27me3_Cvi_I_INPUT vs H3K27me3_Cvi_I_IP |
| GSM615066 |
6301902Cvi - H3K27me3_Cvi_I_IP vs H3K27me3_Cvi_I_INPUT |
| GSM615067 |
12051302Cvi - H3K27me3_Cvi_I_INPUT vs H3K27me3_Cvi_I_IP |
| GSM615068 |
6300802Cvi - H3K27me3_Cvi_I_IP vs H3K27me3_Cvi_I_INPUT |
| GSM615069 |
14984002Cvi - H3K27me3_Cvi_II_INPUT vs H3K27me3_Cvi_II_IP |
| GSM615070 |
14980502Cvi - H3K27me3_Cvi_II_IP vs H3K27me3_Cvi_II_INPUT |
| GSM615071 |
14986302Cvi - H3K27me3_Cvi_II_INPUT vs H3K27me3_Cvi_II_IP |
| GSM615072 |
14984102Cvi - H3K27me3_Cvi_II_IP vs H3K27me3_Cvi_II_INPUT |
|
| This SubSeries is part of SuperSeries: |
| GSE24836 |
Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions |
|
| Relations |
| BioProject |
PRJNA134555 |
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