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Series GSE25128 Query DataSets for GSE25128
Status Public on Nov 04, 2010
Title Gene expression data from Pseudomonas aeruginosa strains isolated from cystic fibrosis lung infections
Organism Pseudomonas aeruginosa
Experiment type Expression profiling by array
Summary Pseudomonas aeruginosa is a common pathogen in the lungs of the cystic fibrosis patients. As infection develops the organism progressively adapts to its environment and its mode of pathogenesis alters, frequently including the loss of quorum sensing regulated virulence factors.
We used microarrays to detail differences between two P. aeruginosa isolates from CF patients, one of which (UUPA38) exhibited an active quorum sensing system (QS+) typical of early acute infection while the other (UUPA85) was QS-compromised (QS-) typical of chronic CF-adapted infection.
 
Overall design Bacterial cell biomass was harvested from triplicate biofilm and planktonic cultures of each of 2 strains of P. aeruginosa. RNA was extracted, converted to cDNA and hybridized to Affymetrix microarrays. We aimed to identify genes which were differentially transcribed between the 2 isolates during both modes of growth.
 
Contributor(s) Pattison SH, Delgianni E, Moore JE, Elborn JS, Dooley JS
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 03, 2010
Last update date Jul 06, 2016
Contact name Sally Helene Pattison
E-mail(s) s.pattison@qub.ac.uk
Organization name Queen's University Belfast
Department Centre for Infection & Immunity
Street address MBC 97 Lisburn Road
City Belfast
ZIP/Postal code BT9 7BL
Country United Kingdom
 
Platforms (1)
GPL84 [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array
Samples (12)
GSM617286 biofilm grown QS- strain UUPA85, biological rep 1
GSM617287 biofilm grown QS- strain UUPA85, biological rep 2
GSM617288 biofilm grown QS- strain UUPA85, biological rep 3
This SubSeries is part of SuperSeries:
GSE25130 Novel virulence factors in host-adapted Pseudomonas aeruginosa infection of the Cystic Fibrosis airways
Relations
BioProject PRJNA142761

Biofilm_UUPA85_relative_to_UUPA38 header descriptions
Affy Probe Ids
Gene Name
UUPA38 Biofilm Flags
UUPA38 Biofilm Raw Data
UUPA85 Biofilm Flags
UUPA85 Biofilm Raw Data
Fold Change
Public Identifier
Description
GO Biological Process
GO Cellular Component
GO Molecular Function
Strain 2 Biofilm t-test P-value

Data table
Affy Probe Ids Gene Name UUPA38 Biofilm Flags UUPA38 Biofilm Raw Data UUPA85 Biofilm Flags UUPA85 Biofilm Raw Data Fold Change Public Identifier Description GO Biological Process GO Cellular Component GO Molecular Function Strain 2 Biofilm t-test P-value
Pae_M57501cds_g_at --- P 3018.75 A 3.61 -112.53 M57501 --- 0001539 // ciliary or flagellar motility // inferred from electronic annotation 0009288 // flagellin-based flagellum // inferred from electronic annotation /// 0009420 // flagellin-based flagellum filament // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation 0005198 // structural molecule activity // inferred from electronic annotation 0.0122
PA3577_i_at --- P 302.41 A 0.74 -101.04 PA3577 hypothetical protein --- --- --- 0.0122
PA4310_pctB_at pctB P 264.94 A 1.14 -99.32 PA4310 chemotactic transducer PctB --- --- --- 0.0122
PA0644_at --- P 90.69 A 0.39 -90.22 PA0644 hypothetical protein --- --- --- 0.0123
Pae_orfH_at --- P 132.17 A 0.96 -86.77 Pae_orfH --- --- --- --- 0.0127
Pae_orfK_at --- P 222.37 A 1.59 -77.17 Pae_orfK --- --- --- --- 0.0131
Pae_L81176cds6_at --- P 308.34 A 3.44 -71.99 L81176 --- 0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006928 // cell motility // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009296 // flagellum biogenesis // inferred from electronic annotation /// 0043064 // flagellum organization and biogenesis // inferred from electronic annotation 0005622 // intracellular // inferred from electronic annotation /// 0009288 // flagellin-based flagellum // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // transcription factor activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation 0.0153
Pae_flgL_at --- P 130.94 A 1.19 -71.54 Pae_flgL --- --- --- --- 0.0135
PA4211_g_at phzB1 /// phzB2 P 2176.57 P,A 21.86 -66.64 PA4211 probable phenazine biosynthesis protein --- --- --- 0.0132
PA2104_at --- P 77.78 A 0.81 -58.57 PA2104 probable cysteine synthase --- --- --- 0.0143
Pae_L81176cds5_at --- P 581.20 A 7.16 -57.07 L81176 --- 0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006928 // cell motility // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009296 // flagellum biogenesis // inferred from electronic annotation /// 0043064 // flagellum organization and biogenesis // inferred from electronic annotation 0005622 // intracellular // inferred from electronic annotation /// 0009288 // flagellin-based flagellum // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // transcription factor activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation 0.0153
PA0634_at --- P 53.32 A 0.67 -51.65 PA0634 hypothetical protein --- --- --- 0.0149
PA3905_at --- P 136.07 A 1.96 -49.01 PA3905 hypothetical protein --- --- --- 0.0154
Pae_orfC_at --- P 348.62 A 5.91 -44.57 Pae_orfC --- --- --- --- 0.0187
PA0997_at pqsB P 2339.97 A 34.72 -43.52 PA0997 Homologous to beta-keto-acyl-acyl-carrier protein synthase --- --- --- 0.0150
Pae_flgK_at --- P 202.02 A 3.68 -41.57 Pae_flgK --- --- --- --- 0.0180
Pae_orfD_at --- P 184.65 A 3.00 -41.19 Pae_orfD --- --- --- --- 0.0150
PA0642_at --- P 25.15 A 0.57 -40.54 PA0642 hypothetical protein --- --- --- 0.0204
PA3479_rhlA_at rhlA P 1810.05 P 30.40 -39.69 PA3479 rhamnosyltransferase chain A --- --- --- 0.0161
PA1902_s_at phzD1 /// phzD2 P 408.24 A 6.39 -39.19 PA1902 phenazine biosynthesis protein PhzD --- --- --- 0.0165

Total number of rows: 5900

Table truncated, full table size 783 Kbytes.




Planktonic_UUPA85_relative_to_UUPA38 header descriptions
Affy Probe Ids
Gene Name
UUPA38 Planktonic Flags
UUPA38 Planktonic Raw Data
UUPA85 Planktonic Flags
UUPA85 Planktonic Raw Data
Fold Change
Public Identifier
Description
GO Biological Process
GO Cellular Component
GO Molecular Function
Strain 2 Normal t-test P-value

Data table
Affy Probe Ids Gene Name UUPA38 Planktonic Flags UUPA38 Planktonic Raw Data UUPA85 Planktonic Flags UUPA85 Planktonic Raw Data Fold Change Public Identifier Description GO Biological Process GO Cellular Component GO Molecular Function Strain 2 Normal t-test P-value
PA4141_at --- P 9320.70 P 201.40 -108.99 PA4141 hypothetical protein --- --- --- 0.0106
Pae_flgL_at --- P 100.64 A 1.13 -108.91 Pae_flgL --- --- --- --- 0.0118
Pae_orfK_at --- P 187.29 A 1.26 -102.98 Pae_orfK --- --- --- --- 0.0111
PA0852_cpbD_at cbpD P 6329.49 P 159.01 -102.58 PA0852 chitin-binding protein CbpD precursor --- --- --- 0.0106
PA4310_pctB_at pctB P 188.80 A 1.30 -100.27 PA4310 chemotactic transducer PctB --- --- --- 0.0110
Pae_orfD_at --- P 154.58 A 2.25 -99.31 Pae_orfD --- --- --- --- 0.0112
Pae_M57501cds_g_at --- P 2642.76 A 1.74 -98.10 M57501 --- 0001539 // ciliary or flagellar motility // inferred from electronic annotation 0009288 // flagellin-based flagellum // inferred from electronic annotation /// 0009420 // flagellin-based flagellum filament // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation 0005198 // structural molecule activity // inferred from electronic annotation 0.0106
Pae_L81176cds6_at --- P 217.81 A 2.62 -96.08 L81176 --- 0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006928 // cell motility // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009296 // flagellum biogenesis // inferred from electronic annotation /// 0043064 // flagellum organization and biogenesis // inferred from electronic annotation 0005622 // intracellular // inferred from electronic annotation /// 0009288 // flagellin-based flagellum // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // transcription factor activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation 0.0109
Pae_L81176cds4_at --- P 263.91 P,A 8.12 -95.97 L81176 --- 0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006928 // cell motility // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009296 // flagellum biogenesis // inferred from electronic annotation /// 0043064 // flagellum organization and biogenesis // inferred from electronic annotation 0005622 // intracellular // inferred from electronic annotation /// 0009288 // flagellin-based flagellum // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // transcription factor activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation 0.0111
PA3577_i_at --- P 100.79 A 1.13 -95.65 PA3577 hypothetical protein --- --- --- 0.0119
PA3479_rhlA_at rhlA P 2668.18 P 97.12 -94.63 PA3479 rhamnosyltransferase chain A --- --- --- 0.0107
PA1431_rsaL_at rsaL P 3158.73 P 127.90 -94.45 PA1431 regulatory protein RsaL --- --- --- 0.0109
PA2300_chiC_at chiC P 3208.08 P,A 80.59 -93.89 PA2300 chitinase --- --- --- 0.0106
Pae_orfA_vioA_at --- P 140.51 A 8.18 -86.37 Pae_orfA_vioA --- --- --- --- 0.0143
PA2104_at --- P 48.04 A 1.06 -85.08 PA2104 probable cysteine synthase --- --- --- 0.0139
PA4211_g_at phzB1 /// phzB2 P 2012.79 P,A 60.61 -82.24 PA4211 probable phenazine biosynthesis protein --- --- --- 0.0106
PA2106_at --- P 74.35 A 3.67 -78.88 PA2106 hypothetical protein --- --- --- 0.0135
PA1887_at --- P 126.13 A 6.90 -76.16 PA1887 hypothetical protein --- --- --- 0.0143
Pae_orfB_at --- P 508.82 P,A 13.00 -72.12 Pae_orfB --- --- --- --- 0.0119
Pae_orfC_at --- P 301.09 A 13.90 -69.58 Pae_orfC --- --- --- --- 0.0131

Total number of rows: 5900

Table truncated, full table size 787 Kbytes.




UUPA38_biofilm_relative_to_planktonic header descriptions
Affy Probe Ids
Gene Name
UUPA38 Planktonic Flags
UUPA38 Planktonic Raw Data
UUPA38 Biofilm Flags
UUPA38 Biofilm Raw Data
Fold Change
Public Identifier
Description
GO Biological Process
GO Cellular Component
GO Molecular Function
Strain 1 Biofilm t-test P-value

Data table
Affy Probe Ids Gene Name UUPA38 Planktonic Flags UUPA38 Planktonic Raw Data UUPA38 Biofilm Flags UUPA38 Biofilm Raw Data Fold Change Public Identifier Description GO Biological Process GO Cellular Component GO Molecular Function Strain 1 Biofilm t-test P-value
PA4139_at --- P 4165.35 P 127.93 -56.98 PA4139 hypothetical protein --- --- --- 0.0080
PA0627_at --- A 5.91 A 0.70 -25.49 PA0627 conserved hypothetical protein --- --- --- 0.0318
AFFX-Athal_actin_at --- A 1.16 A 0.07 -23.34 U37281 --- --- 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation 0000166 // nucleotide binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation 0.1239
PA4306_at --- P 1209.06 P 128.97 -21.03 PA4306 hypothetical protein --- --- --- 0.0082
PA3157_at --- A 4.65 A 0.61 -17.35 PA3157 probable acetyltransferase --- --- --- 0.0423
ig_1246788_1247932_at --- A 3.65 A 0.53 -17.08 1236788 --- --- --- --- 0.0411
PA0865_hpd_at hpd P 808.09 P 117.49 -16.25 PA0865 4-hydroxyphenylpyruvate dioxygenase --- --- --- 0.0080
PA1371_at --- A 1.31 A 0.49 -15.55 PA1371 hypothetical protein --- --- --- 0.1594
PA0179_at --- P 1544.96 P 229.46 -15.33 PA0179 probable two-component response regulator --- --- --- 0.0064
PA2008_fahA_at fahA P 757.71 P 120.47 -15.00 PA2008 fumarylacetoacetase --- --- --- 0.0078
ig_788253_789144_at --- A 3.99 A 0.75 -13.57 778253 --- --- --- --- 0.0672
PA4078_at --- P 619.36 P 100.19 -13.43 PA4078 probable nonribosomal peptide synthetase --- --- --- 0.0056
PA1392_at --- A 4.57 A 1.48 -13.33 PA1392 hypothetical protein --- --- --- 0.1059
PA2009_hmgA_at hmgA P 503.25 P 90.89 -13.30 PA2009 homogentisate 1,2-dioxygenase --- --- --- 0.0081
PA2007_maiA_i_at maiA P 269.33 P,A 51.12 -12.77 PA2007 maleylacetoacetate isomerase --- --- --- 0.0066
PA4140_at --- P 501.63 P 59.79 -12.76 PA4140 hypothetical protein --- --- --- 0.0060
PA1914_at --- P 382.96 P 63.12 -11.97 PA1914 conserved hypothetical protein --- --- --- 0.0054
PA3190_at --- P 320.83 P,M,A 58.02 -11.71 PA3190 probable binding protein component of ABC sugar transporter --- --- --- 0.0060
Pae_AF133699cds3_at --- M,A 1.57 A 0.36 -11.61 AF133699 --- 0006310 // DNA recombination // inferred from electronic annotation /// 0006313 // transposition, DNA-mediated // inferred from electronic annotation /// 0009396 // folic acid and derivative biosynthetic process // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0030655 // beta-lactam antibiotic catabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation 0003677 // DNA binding // inferred from electronic annotation /// 0004156 // dihydropteroate synthase activity // inferred from electronic annotation /// 0004803 // transposase activity // inferred from electronic annotation /// 0008800 // beta-lactamase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation 0.0605
ig_3545073_3545880_at --- A 3.14 A 0.53 -11.46 3535073 --- --- --- --- 0.0356

Total number of rows: 5900

Table truncated, full table size 783 Kbytes.




UUPA85_biofilm_relative_to_planktonic header descriptions
Affy Probe Ids
Gene Name
UUPA85 Planktonic Flags
UUPA85 Planktonic Raw Data
UUPA85 Biofilm Flags
UUPA85 Biofilm Raw Data
Fold Change
Public Identifier
Description
GO Biological Process
GO Cellular Component
GO Molecular Function
Strain 2 Biofilm t-test P-value

Data table
Affy Probe Ids Gene Name UUPA85 Planktonic Flags UUPA85 Planktonic Raw Data UUPA85 Biofilm Flags UUPA85 Biofilm Raw Data Fold Change Public Identifier Description GO Biological Process GO Cellular Component GO Molecular Function Strain 2 Biofilm t-test P-value
PA2111_at --- P 2195.49 P 98.00 -8.77 PA2111 hypothetical protein --- --- --- 0.0221
PA2113_at --- P 1354.27 P 73.57 -8.32 PA2113 probable porin --- --- --- 0.0213
PA2116_at --- P 1417.53 P,M,A 95.87 -8.14 PA2116 conserved hypothetical protein --- --- --- 0.0230
PA2110_at --- P 1156.65 P 72.29 -7.24 PA2110 hypothetical protein --- --- --- 0.0214
PA2112_at --- P 2172.06 P 134.79 -6.34 PA2112 conserved hypothetical protein --- --- --- 0.0212
PA2003_bdhA_at bdhA P 1089.97 P 106.08 -6.09 PA2003 3-hydroxybutyrate dehydrogenase --- --- --- 0.0237
PA2004_at --- P 222.48 A 21.01 -5.48 PA2004 conserved hypothetical protein --- --- --- 0.0257
PA3558_at --- P 1330.79 P 152.37 -5.23 PA3558 hypothetical protein --- --- --- 0.0331
PA4777_at pmrB P 1675.28 P 181.09 -5.13 PA4777 PmrB: two-component regulator system signal sensor kinase PmrB --- --- --- 0.0255
PA3905_at --- P,A 45.78 A 1.96 -5.05 PA3905 hypothetical protein --- --- --- 0.0288
PA2214_at --- P,A 67.53 M,A 11.05 -5.00 PA2214 probable major facilitator superfamily (MFS) transporter --- --- --- 0.1023
PA4071_at --- P,A 96.94 P,A 10.31 -4.78 PA4071 hypothetical protein --- --- --- 0.0648
PA2114_at --- P 1005.39 P 103.86 -4.66 PA2114 probable major facilitator superfamily (MFS) transporter --- --- --- 0.0261
PA3543_algK_at algK P,A 79.15 A 5.02 -4.52 PA3543 alginate biosynthetic protein AlgK precursor --- --- --- 0.0481
PA0696_at --- P,A 111.07 P,A 10.03 -4.44 PA0696 hypothetical protein --- --- --- 0.0659
PA3557_at --- P 999.07 P 154.60 -4.35 PA3557 conserved hypothetical protein --- --- --- 0.0423
PA1109_at --- P,A 36.87 A 2.35 -4.34 PA1109 probable transcriptional regulator --- --- --- 0.0578
PA1953_at --- P,A 84.42 A 10.94 -4.17 PA1953 hypothetical protein --- --- --- 0.0696
Pae_AF241171cds1_r_at --- P,A 216.91 A 22.99 -4.14 AF241171 --- 0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0006118 // electron transport // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006313 // transposition, DNA-mediated // inferred from electronic annotation /// 0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0019629 // propionate catabolic process, 2-methylcitrate cycle // inferred from electronic annotation /// 0045449 // regulation of transcription // inferred from electronic annotation 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation 0000156 // two-component response regulator activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // transcription factor activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0004803 // transposase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // FAD binding // inferred from electronic annotation 0.1292
PA2109_at --- P,A 276.29 A 29.84 -4.13 PA2109 hypothetical protein --- --- --- 0.0402

Total number of rows: 5900

Table truncated, full table size 786 Kbytes.




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Supplementary file Size Download File type/resource
GSE25128_RAW.tar 13.1 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data are available on Series record
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