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Series GSE25132 Query DataSets for GSE25132
Status Public on Feb 05, 2011
Title [E-MTAB-75] Cryptic unstable transcripts in yeast
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Summary Poly(A) and CUT RNA fractions are compared using 3 'Long-SAGE deep-sequencing.

ArrayExpress Release Date: 2008-12-19

Publication Title: Widespread bidirectional promoters are the major source of cryptic transcripts in yeast
Publication Author List: Helen Neil, Christophe Malabat, Yves d'Aubenton-Carafa, Zhenyu Xu, Lars M. Steinmetz and Alain Jacquier

Person Roles: submitter
Person Last Name: Malabat
Person First Name: Christophe
Person Mid Initials:
Person Email: christophe.malabat@pasteur.fr
Person Phone:
Person Address: Unité de Génétique des Interactions Macromoléculaires; CNRS, URA2171,F-75015, Paris, France
Person Affiliation: Institut Pasteur

 
Overall design Experimental Design: genetic_modification_design
Experimental Design: reference_design
Experimental Design: high_throughput_sequencing_design
Experimental Factor Name: Genotype
Experimental Factor Name: StrainOrLine
Experimental Factor Type: genotype
Experimental Factor Type: strain_or_line
 
Citation(s) 19169244
Submission date Nov 03, 2010
Last update date Mar 22, 2012
Organization European Bioinformatics Institute
E-mail(s) miamexpress@ebi.ac.uk
Lab ArrayExpress
Street address Wellcome Trust Genome Campus
City Hinxton
State/province Cambridgeshire
ZIP/Postal code CB10 1SD
Country United Kingdom
 
Platforms (1)
GPL11160 454 GS (Saccharomyces cerevisiae)
Samples (2)
GSM617302 [E-MTAB-75] Cell culture 1
GSM617303 [E-MTAB-75] Cell culture 2
Relations
ArrayExpress E-MTAB-75
BioProject PRJNA134585

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25132_run1.fna.gz 19.3 Mb (ftp)(http) FNA
GSE25132_run1.qual.gz 42.2 Mb (ftp)(http) QUAL
GSE25132_sage.txt.gz 751.9 Kb (ftp)(http) TXT
Processed data are available on Series record
Raw data are available on Series record

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