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Series GSE25174 Query DataSets for GSE25174
Status Public on Nov 10, 2010
Title The zinc cluster transcription factor Ahr1p directs Mcm1p regulation of Candida albicans adhesion
Organism Candida albicans
Experiment type Expression profiling by array
Genome binding/occupancy profiling by genome tiling array
Summary Biofilm development by Candida albicans requires cell adhesion for the initial establishment of the biofilm and the continued stability after hyphal development occurs; however, the regulation of the process has not been fully established. Using chromatin immunoprecipitation coupled to microarray analysis (ChIP-chip) we have characterized a regulon containing the Mcm1p factor that is required for the initial surface adhesion during biofilm formation. In the yeast Saccharomyces cerevisiae several Mcm1p regulons have been characterized in which regulatory specificity is achieved through co-factors binding a sequence adjacent to the Mcm1p-binding site. This new Mcm1p regulon in C. albicans also requires a co-factor, which we identify as the transcription factor Ahr1p. However, in contrast to the other yeast regulons, Ahr1p alone binds the target promoters, which include several key adhesion genes, and recruits Mcm1p to these sites. Through transcription profiling and qPCR analysis, we demonstrate that this Ahr1p-Mcm1p complex directly activates these adhesion genes. When the regulon was disrupted by deleting AHR1, the strain displayed reduced adherence to a polystyrene surface. We also demonstrate a role for the regulon in hyphal growth and in virulence. Our work thus establishes a new mechanism of Mcm1p-directed regulation distinct from those observed for other Mcm1p co-regulators.
 
Overall design We performed genome wide occupancy experiments (YPD, 30oC) with Ahr1p and Mcm1p to determine their binding sites. To confirm an interaction between the two factors we also performed genome wide occupancy with Mcm1p in an ahr1 deletion strain. To complement with genome wide occupancy experiments, we performed a transcription profile with an ahr1 deletion strain under yeast conditions (YPD, 30oC).
 
Contributor(s) Askew C, Sellam A, Epp E, Mallick J, Hogues H, Mullick A, Nantel A, Whiteway M
Citation(s) 21299649
Submission date Nov 05, 2010
Last update date Sep 21, 2012
Contact name Adnane Sellam
Organization name Adnane Sellam
Department Anatomy and Cell Biology
Lab Genetic group - BRI NRC Canada
Street address 6100 Royalmount
City Montreal
State/province Quebec
ZIP/Postal code H4P 2R2
Country Canada
 
Platforms (2)
GPL9818 NRC-BRI C. albicans expression microarray V2.0
GPL10637 Agilent custom C. albicans tiling array - antisense (Crick)
Samples (7)
GSM618357 ahr1 yeast vs WT yeast (replica 1)
GSM618358 ahr1 yeast vs WT yeast (replica 2)
GSM618359 ahr1 yeast vs WT yeast (replica 3)
Relations
BioProject PRJNA134433

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25174_RAW.tar 10.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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