|
| Status |
Public on Nov 11, 2010 |
| Title |
BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS in HUES lines |
| Project |
Roadmap Epigenomics
|
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
Characterization of the reference epigenome in humans in a diverse panel of ES cells, tissue stem cells, reprogrammed stem cells, primary cells and tissues
****************
For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
****************
|
| |
|
| Overall design |
BI Human Reference Epigenome Mapping Project - samples and experiments will continue to be added to this study over the course of the project.
EDACC Genboree Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSTUDY%2FEDACC.4057
|
| Web link |
http://www.ncbi.nlm.nih.gov/geo/roadmap/epigenomics/
|
| |
|
| Contributor(s) |
Bernstein BE, Meissner A |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| BioProject |
PRJNA34535 |
| |
| Submission date |
Nov 09, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
BROAD INSTITUTE |
| E-mail(s) |
rharris1@bcm.tmc.edu
|
| Organization name |
Broad Institute
|
| Street address |
-
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02142 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
| Samples (11)
|
| GSM621591 |
Bisulfite-Seq analysis of RRBS519 derived from human HUES63 cells; RRBS519 |
| GSM621592 |
Bisulfite-Seq analysis of RRBS554 derived from human HUES66 cells; RRBS554 |
| GSM621594 |
Bisulfite-Seq analysis of RRBS520 derived from human HUES64 cells; RRBS520 |
| GSM621595 |
Bisulfite-Seq analysis of RRBS516 derived from human HUES62 cells; RRBS516 |
| GSM621598 |
Bisulfite-Seq analysis of RRBS548 derived from human HUES48 cells; RRBS548 |
| GSM621599 |
Bisulfite-Seq analysis of RRBS552 derived from human HUES65 cells; RRBS552 |
| GSM621601 |
Bisulfite-Seq analysis of RRBS550 derived from human HUES53 cells; RRBS550 |
| GSM621603 |
Bisulfite-Seq analysis of RRBS556 derived from human HUES49 cells; RRBS556 |
| GSM621606 |
Bisulfite-Seq analysis of RRBS542 derived from human HUES28 cells; RRBS542 |
| GSM670089 |
Bisulfite-Seq analysis of RRBS544 derived from human HUES44 cells; RRBS544 |
| GSM670091 |
Bisulfite-Seq analysis of RRBS546 derived from human HUES45 cells; RRBS546 |
|
| Relations |
| SRA |
SRP004245 |
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