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Series GSE253594 Query DataSets for GSE253594
Status Public on Apr 26, 2024
Title The prenatal nicotine exposure leads to epigenetic alterations in nervous system signaling genes in the rat [MeDIP]
Organism Rattus norvegicus
Experiment type Methylation profiling by high throughput sequencing
Summary Background. Prenatal exposure to nicotine has been documented to impose numerous deleterious effects on fetal development. However, the epigenetic changes promoted by nicotine exposure on germ cell are still not well understood. Objectives. In this study, we focused on elucidating the impact of prenatal nicotine exposure on regulatory epigenetic mechanisms important for the germ cells development. s important for the germ cells development
 
Overall design Sprague-Dawley rats were exposed to nicotine during pregnancy and male progeny was analyzed at age of 11 weeks. A genome-wide DNA methylation was analyzed using MEDIP-seq.
 
Contributor(s) Smagulova F
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Submission date Jan 18, 2024
Last update date Apr 27, 2024
Contact name Fatima SMAGULOVA
E-mail(s) fatima.smagulova@inserm.fr
Phone +3323233662
Organization name Irset - U1085
Lab Chromatin, Epigenetics, Environment
Street address 9 av. Prof. Léon Bernard
City Rennes
ZIP/Postal code 35000
Country France
 
Platforms (1)
GPL32190 NextSeq 2000 (Rattus norvegicus)
Samples (7)
GSM8023944 rat testis, MEDIP control 1
GSM8023945 rat testis, MEDIP control 2
GSM8023946 rat testis, MEDIP control 3
This SubSeries is part of SuperSeries:
GSE253596 The prenatal nicotine exposure leads to epigenetic alterations in nervous system signaling genes in the rat
Relations
BioProject PRJNA1066336

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Supplementary file Size Download File type/resource
GSE253594_RAW.tar 886.4 Mb (http)(custom) TAR (of BEDGRAPH)
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Raw data are available in SRA

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