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Series GSE254496 Query DataSets for GSE254496
Status Public on Feb 23, 2024
Title MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication
Organisms Zea mays; Zea mays subsp. parviglumis
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Jan 29, 2024
Last update date Apr 09, 2024
Contact name Jonathan Cahn
E-mail(s) cahnjonathan@gmail.com
Organization name CSHL
Street address 1 Bungtown Rd
City Cold Spring Harbor
State/province NY
ZIP/Postal code 11724
Country USA
 
Platforms (2)
GPL20156 Illumina NextSeq 500 (Zea mays)
GPL34141 Illumina NextSeq 500 (Zea mays subsp. parviglumis)
Samples (226)
GSM8043054 ChIPseq of H3K27ac in B73 coleoptilar nodes Rep1
GSM8043055 ChIPseq of H3K27ac in B73 coleoptilar nodes Rep2
GSM8043056 ChIPseq of H3K4me1 in B73 coleoptilar nodes Rep1
This SuperSeries is composed of the following SubSeries:
GSE254486 MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication
GSE254487 MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication
GSE254488 MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication
Relations
BioProject PRJNA1070669

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE254496_RAW.tar 25.0 Gb (http)(custom) TAR (of BROADPEAK, BW, NARROWPEAK, TXT)
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