|
| Status |
Public on Apr 17, 2024 |
| Title |
Prophage-encoded methyltransferase upregulates virulence to drive adaptation in an outbreak of community-acquired methicillin-resistant Staphylococcus aureus [Harm analysis] |
| Organism |
Staphylococcus aureus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To determine the effects of phage m⏀11 on gene expression in USA300 (LAC*)
|
| |
|
| Overall design |
Comparative gene expression analysis of USA300 LAC* with and without m⏀11, using two biological replicates grown to late exponential phase
|
| |
|
| Contributor(s) |
Ulrich RJ, Shopsin B |
| Citation(s) |
38659881 |
| |
| Submission date |
Feb 08, 2024 |
| Last update date |
May 17, 2024 |
| Contact name |
Robert Ulrich |
| E-mail(s) |
Robert.Ulrich@nyulangone.org
|
| Organization name |
NYU Langone Health
|
| Street address |
430 East 29th Street, Room 507
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10016 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL27158 |
Illumina NovaSeq 6000 (Staphylococcus aureus) |
|
| Samples (4)
|
| GSM8070192 |
USA300 LAC* cells, WT biological replicate A |
| GSM8070193 |
USA300 LAC* cells, WT biological replicate B |
| GSM8070194 |
USA300 LAC* cells, WT/m⏀11 biological replicate A |
| GSM8070195 |
USA300 LAC* cells, WT/m⏀11 biological replicate B |
|
| Relations |
| BioProject |
PRJNA1074732 |
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