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Series GSE25595 Query DataSets for GSE25595
Status Public on Jun 27, 2011
Title The small RNA PhrS stimulates synthesis of the Pseudomonas aeruginosa quinolone signal
Organism Pseudomonas aeruginosa
Experiment type Expression profiling by array
Summary Quorum sensing, a cell-to-cell communication system based on small signal molecules, is employed by the human pathogen Pseudomonas aeruginosa to regulate virulence and biofilm development. Moreover, regulation by small trans-encoded RNAs has become a focal issue in virulence gene expression of bacterial pathogens. In this study, we have identified the small RNA PhrS as an activator of PqsR synthesis, one of the key quorum sensing regulators in P. aeruginosa. Genetic studies revealed a novel mode of regulation by a sRNA, whereby PhrS uses a base-pairing mechanism to activate a short upstream open reading frame to which the pqsR gene is translationally coupled. Expression of phrS is induced by the oxygen-responsive regulator ANR when the oxygen supply decreases. Thus, PhrS is the first bacterial sRNA that provides a regulatory link between oxygen availability and quorum sensing, which may impact on oxygen-limited growth in P. aeruginosa biofilms.

Keywords: genetic modification
 
Overall design Comparative transcriptome analysis with the delta-phrS strains PAO6671(pJT19) and PAO6671(pJTphrS), whereby the first strain harboured the parental vector and the latter a plasmid-borne inducible phrS gene
 
Contributor(s) Sonnleitner E, Gonzalez N, Haas D, Blaesi U
Citation(s) 21375594
Submission date Nov 24, 2010
Last update date Jul 06, 2016
Contact name Sylvain Pradervand
E-mail(s) Sylvain.Pradervand@unil.ch
Phone +41 21 692 39 08
Organization name UNI Lausanne
Department CIG
Lab DNA Array Facility
Street address Genopode
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL84 [Pae_G1a] Affymetrix Pseudomonas aeruginosa Array
Samples (4)
GSM629176 vector_contol_repA
GSM629177 vector_contol_repB
GSM629178 inducible_phrS_gene_repA
Relations
BioProject PRJNA134237

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25595_RAW.tar 4.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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