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Series GSE256543 Query DataSets for GSE256543
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR100DTS)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against eGFP-mef-2 in L1 larva worms.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR100DTS/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (2)
GSM8106124 TF ChIP-seq from whole organism (ENCLB698KLJ)
GSM8106125 TF ChIP-seq from whole organism (ENCLB579DNX)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256543_ENCFF092XMS_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF187QZV_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF259LXN_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256543_ENCFF351NXF_signal_of_unique_reads_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF407FGN_optimal_IDR_thresholded_peaks_ce10.bigBed 61.5 Kb (ftp)(http) BIGBED
GSE256543_ENCFF415FBE_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF429LRC_read-depth_normalized_signal_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF471VMN_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF518QBA_peaks_and_background_as_input_for_IDR_ce11.bed.gz 709.2 Kb (ftp)(http) BED
GSE256543_ENCFF528NMF_optimal_IDR_thresholded_peaks_ce11.bed.gz 15.6 Kb (ftp)(http) BED
GSE256543_ENCFF690WLA_peaks_and_background_as_input_for_IDR_ce10.bed.gz 710.3 Kb (ftp)(http) BED
GSE256543_ENCFF706ZQI_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256543_ENCFF759DQV_optimal_IDR_thresholded_peaks_ce11.bigBed 61.6 Kb (ftp)(http) BIGBED
GSE256543_ENCFF900PIH_optimal_IDR_thresholded_peaks_ce10.bed.gz 15.6 Kb (ftp)(http) BED
GSE256543_RAW.tar 121.9 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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