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Series GSE256543 Query DataSets for GSE256543
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR100DTS)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against eGFP-mef-2 in L1 larva worms.

For data usage terms and conditions, please refer to and
Overall design
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (2)
GSM8106124 TF ChIP-seq from whole organism (ENCLB698KLJ)
GSM8106125 TF ChIP-seq from whole organism (ENCLB579DNX)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256543_ENCFF092XMS_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF187QZV_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF259LXN_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256543_ENCFF351NXF_signal_of_unique_reads_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF407FGN_optimal_IDR_thresholded_peaks_ce10.bigBed 61.5 Kb (ftp)(http) BIGBED
GSE256543_ENCFF415FBE_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF429LRC_read-depth_normalized_signal_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF471VMN_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256543_ENCFF518QBA_peaks_and_background_as_input_for_IDR_ce11.bed.gz 709.2 Kb (ftp)(http) BED
GSE256543_ENCFF528NMF_optimal_IDR_thresholded_peaks_ce11.bed.gz 15.6 Kb (ftp)(http) BED
GSE256543_ENCFF690WLA_peaks_and_background_as_input_for_IDR_ce10.bed.gz 710.3 Kb (ftp)(http) BED
GSE256543_ENCFF706ZQI_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256543_ENCFF759DQV_optimal_IDR_thresholded_peaks_ce11.bigBed 61.6 Kb (ftp)(http) BIGBED
GSE256543_ENCFF900PIH_optimal_IDR_thresholded_peaks_ce10.bed.gz 15.6 Kb (ftp)(http) BED
GSE256543_RAW.tar 121.9 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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